Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR30E-201ENST00000362104 92 ntBASIC4.43□□□□□ -1.7
RTN4Q9NQC3 RPL21P65-201ENST00000406094 466 ntBASIC4.43□□□□□ -1.7
RTN4Q9NQC3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.43□□□□□ -1.7
RTN4Q9NQC3 AC010401.1-201ENST00000463867 348 ntBASIC4.43□□□□□ -1.7
RTN4Q9NQC3 AC096725.1-201ENST00000514266 313 ntBASIC4.43□□□□□ -1.7
RTN4Q9NQC3 SNORA31.25-201ENST00000517242 134 ntBASIC4.43□□□□□ -1.7
RTN4Q9NQC3 AC068657.1-201ENST00000520807 306 ntBASIC4.43□□□□□ -1.7
RTN4Q9NQC3 MIR3129-201ENST00000581095 76 ntBASIC4.43□□□□□ -1.7
RTN4Q9NQC3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RTN4Q9NQC3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RTN4Q9NQC3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4Q9NQC3 SNORD35B-201ENST00000363660 87 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 RPL21P3-201ENST00000395517 478 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 AL603914.1-201ENST00000401964 204 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 MIR548O-201ENST00000408583 114 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 AL158823.1-201ENST00000418441 478 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 RPL29P14-201ENST00000495837 428 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 MIR4709-201ENST00000577272 72 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 MIR5684-201ENST00000585074 65 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 ZNF861P-201ENST00000588126 639 ntBASIC4.42□□□□□ -1.7
RTN4Q9NQC3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
RTN4Q9NQC3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTN4Q9NQC3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN4Q9NQC3 RNA5SP447-201ENST00000363749 119 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 SNORD116-14-201ENST00000383894 92 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 SNORD116-17-201ENST00000383929 92 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 SNORD116-15-201ENST00000384445 92 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 SNORD116-19-201ENST00000384729 92 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 SNORA31.10-201ENST00000516482 106 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.41□□□□□ -1.7
RTN4Q9NQC3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RTN4Q9NQC3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN4Q9NQC3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.4□□□□□ -1.7
RTN4Q9NQC3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTN4Q9NQC3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTN4Q9NQC3 Y_RNA.127-201ENST00000363386 109 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 RNU6-112P-201ENST00000363599 104 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 RNU6-268P-201ENST00000364174 107 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 RNU6-1031P-201ENST00000384773 107 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 MIR891A-201ENST00000401237 79 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 AC016397.1-201ENST00000412463 242 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN4Q9NQC3 RNU4-57P-201ENST00000515980 135 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 AC025627.2-201ENST00000576220 160 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
RTN4Q9NQC3 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.71
RTN4Q9NQC3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTN4Q9NQC3 MIR1251-201ENST00000408552 70 ntBASIC4.39□□□□□ -1.71
RTN4Q9NQC3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4Q9NQC3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN4Q9NQC3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.39□□□□□ -1.71
RTN4Q9NQC3 RNU6-833P-201ENST00000363486 107 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 SNORA3A-201ENST00000364113 130 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 RNU6-424P-201ENST00000384367 105 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 RPS26P8-201ENST00000393490 348 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 AF228730.3-201ENST00000436691 102 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 RPS29P33-201ENST00000456717 146 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 snoU13.27-201ENST00000459278 104 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 RPL23AP63-201ENST00000498752 471 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 AC245884.12-201ENST00000615364 59 ntBASIC4.38□□□□□ -1.71
RTN4Q9NQC3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTN4Q9NQC3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RTN4Q9NQC3 SNORD115-28-201ENST00000363931 81 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 RNA5SP366-201ENST00000365454 123 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 RNU6-1336P-201ENST00000383886 109 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 RNA5SP450-201ENST00000411206 102 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 AL035423.1-201ENST00000420331 213 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 AC087499.4-201ENST00000448505 178 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 RNU7-34P-201ENST00000459394 64 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 AC114811.1-201ENST00000507207 168 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 AC090049.2-201ENST00000550377 109 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 AP000346.3-201ENST00000622821 210 ntBASIC4.37□□□□□ -1.71
RTN4Q9NQC3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN4Q9NQC3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN4Q9NQC3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RTN4Q9NQC3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTN4Q9NQC3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTN4Q9NQC3 MIR148B-201ENST00000362252 99 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 Y_RNA.71-201ENST00000362892 104 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 U8.9-201ENST00000365667 134 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 SNORA1-201ENST00000384107 130 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 MIR518F-201ENST00000384973 87 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 SNRPGP14-201ENST00000435400 219 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.36□□□□□ -1.71
RTN4Q9NQC3 RNU7-193P-201ENST00000516723 65 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 AL513423.1-201ENST00000621695 132 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 MIR203B-201ENST00000636080 86 ntBASIC4.36□□□□□ -1.71
RTN4Q9NQC3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RTN4Q9NQC3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RTN4Q9NQC3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4Q9NQC3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTN4Q9NQC3 Y_RNA.52-201ENST00000362760 96 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 U8.1-201ENST00000362843 134 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 CYCSP49-201ENST00000420810 319 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 HSPE1P9-201ENST00000440046 311 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 snoU13.1-201ENST00000459157 104 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 RN7SL604P-201ENST00000492589 296 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 Y_RNA.690-201ENST00000516603 95 ntBASIC4.35□□□□□ -1.71
RTN4Q9NQC3 YPEL5P3-201ENST00000547227 352 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 496.9 ms