Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC010615.1-201ENST00000594254 1764 ntBASIC1.24□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.58-201ENST00000362807 102 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.154-201ENST00000363624 102 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 SNORA72.2-201ENST00000365028 127 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 RNY3P1-201ENST00000365085 102 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 RNY3-201ENST00000365484 102 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 RNU6-417P-201ENST00000384712 107 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.23□□□□□ -2.21
NXF3Q9H4D5 MRPS18CP6-201ENST00000423587 223 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 AC236972.2-201ENST00000434979 310 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 AC099799.1-201ENST00000439809 192 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 UQCRBP2-201ENST00000447827 297 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.23□□□□□ -2.21
NXF3Q9H4D5 RPL26P26-201ENST00000480251 434 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 AC105758.1-201ENST00000506038 399 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 RNU6-911P-201ENST00000516523 104 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 AC024995.1-201ENST00000523014 93 ntBASIC1.23□□□□□ -2.21
NXF3Q9H4D5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
NXF3Q9H4D5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.23□□□□□ -2.21
NXF3Q9H4D5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.23□□□□□ -2.21
NXF3Q9H4D5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
NXF3Q9H4D5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 RNU4-73P-201ENST00000363164 141 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.146-201ENST00000363549 102 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 RNU6-1264P-201ENST00000383891 107 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 Y_RNA.463-201ENST00000384271 102 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AF228730.4-201ENST00000421457 183 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 SNORA40.9-201ENST00000515895 93 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 RNU6-107P-201ENST00000516643 102 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 RNU6-699P-201ENST00000517081 110 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AC022432.1-201ENST00000595739 310 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AL117336.2-201ENST00000602435 335 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AC006435.5-201ENST00000624486 112 ntBASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.22□□□□□ -2.21
NXF3Q9H4D5 AC091812.1-201ENST00000432235 1948 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 RNU6-1115P-201ENST00000362490 106 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 RNU4-79P-201ENST00000362764 141 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 SNORD114-22-201ENST00000365423 72 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 RNY3P4-201ENST00000384428 101 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 RNA5SP467-201ENST00000391274 118 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 SNORD12B-201ENST00000410433 91 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.21□□□□□ -2.22
NXF3Q9H4D5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.21□□□□□ -2.22
NXF3Q9H4D5 SNORD65B-201ENST00000459126 73 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.21□□□□□ -2.22
NXF3Q9H4D5 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 RNA5SP437-201ENST00000517249 129 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 AC018448.1-201ENST00000552843 316 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 AL442163.3-201ENST00000554110 156 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 MIR3684-201ENST00000579779 74 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 MIR4795-201ENST00000584182 89 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 AC091925.1-201ENST00000623204 462 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 AC138305.3-201ENST00000624988 240 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 U6.108-201ENST00000637764 58 ntBASIC1.21□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.314-201ENST00000365114 102 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.498-201ENST00000384460 102 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.2□□□□□ -2.22
NXF3Q9H4D5 RNU6-625P-201ENST00000459412 107 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 RNU7-169P-201ENST00000459456 61 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 RAB11AP2-201ENST00000545905 639 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 AL137100.2-201ENST00000555786 315 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 SNORA77B-201ENST00000578179 125 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 AC136443.5-201ENST00000603741 370 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 AL359075.3-201ENST00000613288 217 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 U2.1-201ENST00000618978 145 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 U6.73-201ENST00000619194 103 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
NXF3Q9H4D5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NXF3Q9H4D5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.191-201ENST00000363972 113 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.428-201ENST00000384078 102 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 Y_RNA.605-201ENST00000410577 105 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 RNU2-7P-201ENST00000410794 178 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 RAB28P5-201ENST00000427490 651 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 AC096644.2-201ENST00000429278 159 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 HSPE1P9-201ENST00000440046 311 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 RPS26P55-201ENST00000471178 356 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 ICE2P2-201ENST00000483823 2787 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.19□□□□□ -2.22
NXF3Q9H4D5 AC010598.1-201ENST00000510378 103 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.19□□□□□ -2.22
NXF3Q9H4D5 RNU1-142P-201ENST00000516682 145 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 SNORD116.3-201ENST00000517176 78 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 AC027419.1-201ENST00000522976 328 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 AP002001.1-203ENST00000534002 267 ntBASIC1.19□□□□□ -2.22
NXF3Q9H4D5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.19□□□□□ -2.22
NXF3Q9H4D5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms