Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RNU1-22P-201ENST00000363334 158 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 RNU6-271P-201ENST00000363858 105 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.243-201ENST00000364481 109 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 SNORA12.1-201ENST00000390873 148 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 RNA5SP475-201ENST00000410568 110 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 AP1B1P2-201ENST00000416196 106 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 AC010154.1-201ENST00000425857 269 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 AL603825.1-201ENST00000438481 80 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.51□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.638-201ENST00000459374 113 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 RNU7-34P-201ENST00000459394 64 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.51□□□□□ -2.17
SNX25Q9H3E2 RNU6-911P-201ENST00000516523 104 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 RNU6-1012P-201ENST00000516606 109 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 MIR4795-201ENST00000584182 89 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 AL929325.1-201ENST00000603096 117 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 AL390123.1-201ENST00000603216 237 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SNX25Q9H3E2 AC104985.2-201ENST00000620598 500 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 MIR8054-201ENST00000620877 86 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.5-201ENST00000362334 102 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 RNU4-79P-201ENST00000362764 141 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.146-201ENST00000363549 102 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 MTCO3P19-201ENST00000415864 321 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.5□□□□□ -2.17
SNX25Q9H3E2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.5□□□□□ -2.17
SNX25Q9H3E2 AC097462.1-201ENST00000514125 324 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 RAB11AP2-201ENST00000545905 639 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 AC015688.6-201ENST00000577737 104 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.5□□□□□ -2.17
SNX25Q9H3E2 AL117336.2-201ENST00000602435 335 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 AC004467.1-201ENST00000615678 330 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 MIR8063-201ENST00000621930 81 ntBASIC1.5□□□□□ -2.17
SNX25Q9H3E2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNX25Q9H3E2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SNX25Q9H3E2 SNORD1A-201ENST00000364968 72 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.315-201ENST00000365117 102 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 RNU6-407P-201ENST00000365280 104 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.361-201ENST00000365515 120 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.49□□□□□ -2.17
SNX25Q9H3E2 MRPL42P3-201ENST00000401492 326 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 AC004965.1-201ENST00000413033 213 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 AC236972.2-201ENST00000434979 310 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 RNA5SP20-201ENST00000515976 84 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 RNU7-172P-201ENST00000517125 64 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 RNU2-12P-201ENST00000517216 168 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.49□□□□□ -2.17
SNX25Q9H3E2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.49□□□□□ -2.17
SNX25Q9H3E2 AC073413.2-201ENST00000604332 360 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.49□□□□□ -2.17
SNX25Q9H3E2 MIR4272-201ENST00000635924 64 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 AC018630.2-201ENST00000534866 2403 ntBASIC1.49□□□□□ -2.17
SNX25Q9H3E2 ICE2P2-201ENST00000483823 2787 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.124-201ENST00000363339 93 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.428-201ENST00000384078 102 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 RNU6-1310P-201ENST00000384153 107 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 MIR628-201ENST00000385229 95 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 RNU6-440P-201ENST00000390882 105 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX25Q9H3E2 MTND4LP11-201ENST00000422184 280 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC018865.2-201ENST00000423631 129 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC245047.3-201ENST00000429428 127 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 FCF1P4-201ENST00000448326 183 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 SNORD116.3-201ENST00000517176 78 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC023442.1-201ENST00000531247 422 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC011476.5-201ENST00000615594 130 ntBASIC1.48□□□□□ -2.17
SNX25Q9H3E2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.48□□□□□ -2.17
SNX25Q9H3E2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.27-201ENST00000362540 103 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.101-201ENST00000363154 102 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 Y_RNA.252-201ENST00000364556 101 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 RNU6-117P-201ENST00000365415 107 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 MT-TD-201ENST00000387419 68 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 MRPL35P1-201ENST00000404272 572 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 AL137792.2-201ENST00000443484 235 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 MIR4659A-201ENST00000580269 81 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 AC091178.2-201ENST00000584401 117 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 VN1R91P-201ENST00000594377 169 ntBASIC1.47□□□□□ -2.17
SNX25Q9H3E2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SNX25Q9H3E2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SNX25Q9H3E2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SNX25Q9H3E2 SNORD114-7-201ENST00000362520 77 ntBASIC1.46□□□□□ -2.18
SNX25Q9H3E2 SNORD115-30-201ENST00000364117 82 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms