Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RNU6-341P-201ENST00000516973 96 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
DDX47Q9H0S4 AC068790.6-201ENST00000602558 258 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 AC092794.2-201ENST00000620933 563 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 U6.115-201ENST00000636045 103 ntBASIC1.15□□□□□ -2.23
DDX47Q9H0S4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
DDX47Q9H0S4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
DDX47Q9H0S4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNU6-199P-201ENST00000362954 107 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNU6-454P-201ENST00000364292 107 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.14□□□□□ -2.23
DDX47Q9H0S4 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNU6-376P-201ENST00000384731 106 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 U8.16-201ENST00000391279 133 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 AL137792.2-201ENST00000443484 235 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 FGF7P6-202ENST00000451282 293 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.14□□□□□ -2.23
DDX47Q9H0S4 SNORA40.9-201ENST00000515895 93 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNU2-56P-201ENST00000516826 190 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNU7-30P-201ENST00000516835 62 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.14□□□□□ -2.23
DDX47Q9H0S4 AC005899.2-201ENST00000584353 90 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 AL022345.2-201ENST00000606307 135 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 PISRT1.1-201ENST00000616930 107 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.14□□□□□ -2.23
DDX47Q9H0S4 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
DDX47Q9H0S4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
DDX47Q9H0S4 SNORA1B-201ENST00000362535 133 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 MIR653-201ENST00000385279 96 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 SNORA75.4-201ENST00000391278 119 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
DDX47Q9H0S4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.13□□□□□ -2.23
DDX47Q9H0S4 RPL17P19-201ENST00000489069 552 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.13□□□□□ -2.23
DDX47Q9H0S4 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 AC005828.6-201ENST00000606610 232 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 BX284668.6-201ENST00000606899 438 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 MIR1244-1-201ENST00000612829 85 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 AC139792.2-201ENST00000624218 587 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 MIR1244-3-201ENST00000635744 85 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 MIR1244-2-201ENST00000636449 85 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 MIR3674-201ENST00000636576 68 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 MIR1244-4-202ENST00000636813 85 ntBASIC1.13□□□□□ -2.23
DDX47Q9H0S4 AC005592.1-201ENST00000566527 1640 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 RNY1P10-201ENST00000363268 113 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 RNU6-117P-201ENST00000365415 107 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 MIR562-201ENST00000384894 95 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 SNORD41-201ENST00000386967 70 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
DDX47Q9H0S4 MIR873-201ENST00000401120 77 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.12□□□□□ -2.23
DDX47Q9H0S4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 RNU6-917P-201ENST00000516294 104 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 RNU7-28P-201ENST00000516759 62 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 AP002004.2-201ENST00000531656 154 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.12□□□□□ -2.23
DDX47Q9H0S4 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
DDX47Q9H0S4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RNU6-392P-201ENST00000364926 101 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RNU6-767P-201ENST00000384132 107 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 SNORA70.7-201ENST00000384159 133 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RNA5SP475-201ENST00000410568 110 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RPL23AP50-201ENST00000434149 455 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 AC005840.1-201ENST00000498412 377 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 AC105758.1-201ENST00000506038 399 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 SNORD116-28-201ENST00000516123 91 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RNU6-307P-201ENST00000516743 106 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RNU6-1213P-201ENST00000517075 94 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 AC090049.2-201ENST00000550377 109 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 AC127459.3-201ENST00000624328 466 ntBASIC1.11□□□□□ -2.23
DDX47Q9H0S4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.11□□□□□ -2.23
DDX47Q9H0S4 RNU6-99P-201ENST00000364721 107 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 RNU6-192P-201ENST00000391253 100 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 SNORD12B-201ENST00000410433 91 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 RNU4-14P-201ENST00000410858 122 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.1□□□□□ -2.23
DDX47Q9H0S4 AC093850.1-201ENST00000454121 251 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 SNORA31.2-201ENST00000516019 134 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.1□□□□□ -2.23
DDX47Q9H0S4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 AL669831.3-213ENST00000636676 183 ntBASIC1.1□□□□□ -2.23
DDX47Q9H0S4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
DDX47Q9H0S4 MIRLET7C-201ENST00000362160 84 ntBASIC1.09□□□□□ -2.23
DDX47Q9H0S4 MIR337-201ENST00000362281 93 ntBASIC1.09□□□□□ -2.23
DDX47Q9H0S4 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
DDX47Q9H0S4 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms