Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 RNA5SP282-201ENST00000516355 108 ntBASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 AC087441.2-201ENST00000529141 262 ntBASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
AMBRA1Q9C0C7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 MIR340-201ENST00000362125 95 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 Y_RNA.180-201ENST00000363867 113 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-899P-201ENST00000363947 107 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-886P-201ENST00000384319 105 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 MTCO2P33-201ENST00000402100 465 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 SRIP3-201ENST00000413200 219 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AC016909.1-201ENST00000415916 166 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 COX6CP10-201ENST00000416832 224 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 HMGB3P3-201ENST00000510526 400 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 RNA5SP24-201ENST00000516478 95 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-1337P-201ENST00000516525 95 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AC072026.1-201ENST00000605023 201 ntBASIC2.39□□□□□ -2.03
AMBRA1Q9C0C7 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 RNU4-70P-201ENST00000384579 139 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 AC104389.3-201ENST00000445629 235 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 RPS20P10-201ENST00000451209 253 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 RPS26P55-201ENST00000471178 356 ntBASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
AMBRA1Q9C0C7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-493P-201ENST00000391321 108 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 MIR1253-201ENST00000408273 105 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 AC060773.1-201ENST00000421698 310 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 AC010154.1-201ENST00000425857 269 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 HSPE1P21-201ENST00000438283 308 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 RPS27P22-201ENST00000478056 241 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-856P-201ENST00000516959 98 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 AC022559.1-201ENST00000520905 205 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 MIR4308-201ENST00000580634 81 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.15-201ENST00000611544 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.16-201ENST00000613119 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.12-201ENST00000613778 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.20-201ENST00000613956 192 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.9-201ENST00000615427 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.11-201ENST00000616345 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.2-201ENST00000616535 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.3-201ENST00000617785 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.19-201ENST00000618602 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 RNU2-1-201ENST00000618664 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.6-201ENST00000619225 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.5-201ENST00000619465 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 U2.10-201ENST00000620268 191 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 AC064859.1-201ENST00000624741 174 ntBASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
AMBRA1Q9C0C7 AL356292.1-201ENST00000283110 373 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-682P-201ENST00000363843 106 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 Y_RNA.233-201ENST00000364407 101 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 U8.7-201ENST00000364940 136 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-1062P-201ENST00000383908 107 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 AL355497.1-201ENST00000406262 551 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 RN7SKP192-201ENST00000411291 327 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 RNU7-141P-201ENST00000459304 62 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 RNU6-861P-201ENST00000516745 106 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 AC068647.2-201ENST00000637380 353 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 CENPCP1-201ENST00000533085 2578 ntBASIC2.36□□□□□ -2.03
AMBRA1Q9C0C7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
AMBRA1Q9C0C7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms