Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 SUMO1P2-201ENST00000452524 304 ntBASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 AC105758.1-201ENST00000506038 399 ntBASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 RNU6-1278P-201ENST00000516130 107 ntBASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 RNU7-40P-201ENST00000516397 64 ntBASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 RNU2-56P-201ENST00000516826 190 ntBASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 PISRT1.1-201ENST00000616930 107 ntBASIC0.86□□□□□ -2.27
GABARAPL3Q9BY60 Y_RNA.279-201ENST00000364763 95 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 RNU6-767P-201ENST00000384132 107 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 RNU4-62P-201ENST00000410125 130 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 RNU4-14P-201ENST00000410858 122 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 RNU6-1291P-201ENST00000516591 104 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 Y_RNA.691-201ENST00000516611 103 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 RNU6-307P-201ENST00000516743 106 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 AC080078.2-201ENST00000603766 501 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 MIR1244-1-201ENST00000612829 85 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 AC127459.3-201ENST00000624328 466 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 MIR1244-3-201ENST00000635744 85 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 MIR1244-2-201ENST00000636449 85 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 MIR1244-4-202ENST00000636813 85 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 AC027514.1-201ENST00000588561 1603 ntBASIC0.85□□□□□ -2.27
GABARAPL3Q9BY60 RNU6-845P-201ENST00000362578 103 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 Y_RNA.166-201ENST00000363730 102 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 SNORA2.2-201ENST00000365473 135 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 RNU6-192P-201ENST00000391253 100 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 SNORD12B-201ENST00000410433 91 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 RNA5SP475-201ENST00000410568 110 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AC093850.1-201ENST00000454121 251 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AC022493.2-201ENST00000506122 481 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 RNU6-1213P-201ENST00000517075 94 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 MIR2355-201ENST00000517199 87 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AL358944.1-201ENST00000528537 144 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AL117336.2-201ENST00000602435 335 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AC080078.3-201ENST00000605407 463 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AC139792.2-201ENST00000624218 587 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 AL669831.3-213ENST00000636676 183 ntBASIC0.84□□□□□ -2.27
GABARAPL3Q9BY60 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 RNU4-79P-201ENST00000362764 141 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-99P-201ENST00000364721 107 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 MIR520G-201ENST00000385064 90 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 SNORA11.2-201ENST00000408318 127 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 PDCL2P1-201ENST00000419302 352 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 Z98949.2-201ENST00000440996 144 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 RNU7-12P-201ENST00000516030 62 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 SNORA31.4-201ENST00000516049 129 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 SNORA70.22-201ENST00000517160 124 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 HSPE1P19-201ENST00000603327 295 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 AC087588.2-201ENST00000617667 426 ntBASIC0.83□□□□□ -2.28
GABARAPL3Q9BY60 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 SNORD115-30-201ENST00000364117 82 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 RNU4-41P-201ENST00000364426 143 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 Y_RNA.363-201ENST00000365529 113 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-1310P-201ENST00000384153 107 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-910P-201ENST00000390844 107 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 AL451046.2-201ENST00000403074 277 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 AC114482.1-201ENST00000418010 247 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 MIR2053-201ENST00000459295 91 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 snoU13.26-201ENST00000459452 105 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 MTND4P17-201ENST00000470444 350 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 AC087343.1-201ENST00000477341 475 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-1096P-201ENST00000517089 102 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 RNU2-12P-201ENST00000517216 168 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 AL157834.3-201ENST00000615543 103 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 CASC19-280ENST00000642102 1351 ntBASIC0.82□□□□□ -2.28
GABARAPL3Q9BY60 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 Y_RNA.577-201ENST00000384794 101 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 MIR222-201ENST00000384992 110 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 MTND4P28-201ENST00000426217 387 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 RPL23AP50-201ENST00000434149 455 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 AL049830.1-201ENST00000468034 425 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-120P-201ENST00000516077 103 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-63P-201ENST00000516690 95 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 AC055872.1-201ENST00000570978 278 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 AC098679.4-201ENST00000624241 654 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 AL391516.1-201ENST00000554380 2449 ntBASIC0.81□□□□□ -2.28
GABARAPL3Q9BY60 Y_RNA.160-201ENST00000363677 92 ntBASIC0.8□□□□□ -2.28
GABARAPL3Q9BY60 RNU6-961P-201ENST00000363893 105 ntBASIC0.8□□□□□ -2.28
GABARAPL3Q9BY60 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms