Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC116353.2-201ENST00000505332 712 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 MIR3682-201ENST00000581338 84 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 MIR8076-201ENST00000611401 83 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 MIR7844-201ENST00000616161 122 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 MIR4251-201ENST00000635819 61 ntBASIC-0.28□□□□□ -2.45
LIMD2Q9BT23 SNORD115-32-201ENST00000364079 82 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 RNU6-396P-201ENST00000365369 105 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 SNORA8.3-201ENST00000384679 139 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 MIR593-201ENST00000384856 100 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 MIR625-201ENST00000385047 85 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 RNA5SP95-201ENST00000410319 137 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 SSR1P2-201ENST00000415208 787 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 PIGPP3-201ENST00000425307 415 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 MTCO2P11-201ENST00000431069 680 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 SNORD123-201ENST00000459473 70 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 SNORA25.14-201ENST00000516481 132 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 MIR3681-201ENST00000580089 72 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 AC064836.2-201ENST00000609491 462 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 MTND5P32-201ENST00000560711 1802 ntBASIC-0.29□□□□□ -2.46
LIMD2Q9BT23 SNORD113-6-201ENST00000363345 75 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 SNORD115-24-201ENST00000363528 82 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 RNU6-674P-201ENST00000363831 107 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 RNA5SP275-201ENST00000363936 118 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 RNU6-117P-201ENST00000365415 107 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 SNORA2A-201ENST00000383885 135 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 AC096531.1-201ENST00000419107 107 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 MTND4LP11-201ENST00000422184 280 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 AC009961.2-201ENST00000435771 251 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 MTND1P26-201ENST00000440488 538 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 snoU109.3-201ENST00000459477 145 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 SNORA18.7-201ENST00000516910 131 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 AF250324.2-201ENST00000608299 610 ntBASIC-0.3□□□□□ -2.46
LIMD2Q9BT23 SNORA27.1-201ENST00000362604 124 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 RNU6-376P-201ENST00000384731 106 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 MIR516B2-201ENST00000385190 85 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 PCNPP3-201ENST00000393579 471 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 MTCYBP4-201ENST00000401524 249 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AL137792.2-201ENST00000443484 235 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AC091179.3-201ENST00000474761 144 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 RPL17P19-201ENST00000489069 552 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 RNA5SP20-201ENST00000515976 84 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 SNORA14.1-201ENST00000516113 141 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AC090897.1-201ENST00000580909 226 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AL670379.3-201ENST00000605040 251 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AC240442.1-201ENST00000616055 283 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 AL158209.2-201ENST00000619266 216 ntBASIC-0.31□□□□□ -2.46
LIMD2Q9BT23 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 MIR643-201ENST00000385267 97 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 RNU6-747P-201ENST00000390928 104 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 RNU6-241P-201ENST00000391148 104 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 RNU6-903P-201ENST00000391270 109 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 HMGN2P22-201ENST00000427588 175 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 AL359672.1-201ENST00000442302 409 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 snoU13.21-201ENST00000459368 105 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 MTCO3P38-201ENST00000468910 766 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 AC093303.1-201ENST00000514549 295 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 MIR5589-201ENST00000579442 60 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 MIR4676-201ENST00000583078 72 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 AC006157.1-201ENST00000611750 366 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 MIR7111-201ENST00000619751 72 ntBASIC-0.32□□□□□ -2.46
LIMD2Q9BT23 SNORA72.1-201ENST00000363485 129 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 SNORD45.3-201ENST00000363836 72 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 RNA5SP368-201ENST00000364298 116 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 RNU6-925P-201ENST00000384629 104 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 MIR329-1-201ENST00000385028 80 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 RNU6-159P-201ENST00000391080 106 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 MIR892B-201ENST00000401279 77 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.33□□□□□ -2.46
LIMD2Q9BT23 SNORD75.1-201ENST00000408373 60 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms