Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC091812.1-201ENST00000432235 1948 ntBASIC1.03□□□□□ -2.25
HDHD3Q9BSH5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.67-201ENST00000362870 100 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.70-201ENST00000362886 110 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RNU6-490P-201ENST00000362985 107 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RNU1-17P-201ENST00000363022 152 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 SNORD26-201ENST00000384147 75 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RNU6-708P-201ENST00000384217 107 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.529-201ENST00000384586 119 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 MIR625-201ENST00000385047 85 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 SNORA17.3-201ENST00000391159 129 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 MIR873-201ENST00000401120 77 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 MRPL35P1-201ENST00000404272 572 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RPL23AP50-201ENST00000434149 455 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RPL30P15-201ENST00000457129 321 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.632-201ENST00000459189 102 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RPS27P22-201ENST00000478056 241 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 AC079140.2-201ENST00000506193 142 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RNU6-699P-201ENST00000517081 110 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 RNU7-172P-201ENST00000517125 64 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 MIR3660-201ENST00000584845 100 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 AP001485.1-201ENST00000604799 199 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 MIR8063-201ENST00000621930 81 ntBASIC1.02□□□□□ -2.25
HDHD3Q9BSH5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.101-201ENST00000363154 102 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RNU6-950P-201ENST00000384651 107 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 MIR1261-201ENST00000408659 82 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RN7SKP200-201ENST00000410564 320 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RNU7-34P-201ENST00000459394 64 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RNU7-94P-201ENST00000459576 63 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 SNORD19B-201ENST00000459623 84 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 AC091021.1-201ENST00000468051 388 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RNU6-408P-201ENST00000515910 100 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RNU7-4P-201ENST00000516961 62 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RNU6-341P-201ENST00000516973 96 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 RNU6-264P-201ENST00000517134 104 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 AC093027.1-201ENST00000546698 429 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 LARP7P1-201ENST00000605576 316 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 AL365434.2-201ENST00000607979 234 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 AL078604.3-201ENST00000615580 211 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 AC240442.1-201ENST00000616055 283 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.01□□□□□ -2.25
HDHD3Q9BSH5 MIR26B-201ENST00000362251 77 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.187-201ENST00000363918 113 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1□□□□□ -2.25
HDHD3Q9BSH5 MTND5P20-201ENST00000448677 143 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1□□□□□ -2.25
HDHD3Q9BSH5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1□□□□□ -2.25
HDHD3Q9BSH5 OR9P1P-201ENST00000496431 281 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 RN7SKP179-201ENST00000516126 217 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 AC004467.1-201ENST00000615678 330 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 AL513423.1-201ENST00000621695 132 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 MIR4272-201ENST00000635924 64 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 AC112487.2-201ENST00000637950 304 ntBASIC1□□□□□ -2.25
HDHD3Q9BSH5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 MIRLET7C-201ENST00000362160 84 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.5-201ENST00000362334 102 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 SNORD33-201ENST00000362761 85 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.259-201ENST00000364619 101 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 RNA5SP475-201ENST00000410568 110 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 PGBD4P5-201ENST00000445958 426 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 AC019176.1-201ENST00000518519 225 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 AC144568.1-201ENST00000520139 137 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 AL512310.8-201ENST00000550183 120 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 MIR4421-201ENST00000578133 69 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 MIR548S-201ENST00000581352 82 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 U2.1-201ENST00000618978 145 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 AC104985.2-201ENST00000620598 500 ntBASIC0.99□□□□□ -2.25
HDHD3Q9BSH5 SNORA1B-201ENST00000362535 133 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.27-201ENST00000362540 103 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.315-201ENST00000365117 102 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RNU6-407P-201ENST00000365280 104 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RNU6-1310P-201ENST00000384153 107 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RNU6-424P-201ENST00000384367 105 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 MIR660-201ENST00000385235 97 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 MIR764-201ENST00000390811 85 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RNU2-61P-201ENST00000411069 191 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 AC096644.2-201ENST00000429278 159 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 AC099799.1-201ENST00000439809 192 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 Z98949.2-201ENST00000440996 144 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 FCF1P4-201ENST00000448326 183 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 SUMO1P2-201ENST00000452524 304 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RNU7-169P-201ENST00000459456 61 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RPL39P38-201ENST00000467018 153 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RPL30P7-201ENST00000479312 323 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 Y_RNA.702-201ENST00000516843 96 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 RNU6-165P-201ENST00000517170 99 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 SUMO2P16-201ENST00000519475 264 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 AC023442.1-201ENST00000531247 422 ntBASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.98□□□□□ -2.25
HDHD3Q9BSH5 MIR3664-201ENST00000579074 99 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms