Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 MTCO2P11-201ENST00000431069 680 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AL137792.2-201ENST00000443484 235 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 SNORA14.1-201ENST00000516113 141 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AL358944.1-201ENST00000528537 144 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 MTND4P33-201ENST00000556706 766 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 MIR1273G-201ENST00000577677 100 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AP000753.3-201ENST00000604083 169 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AC027807.2-201ENST00000616099 408 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 SNORD38B-202ENST00000625943 69 ntBASIC-0.63□□□□□ -2.51
VPS25Q9BRG1 AC010332.2-201ENST00000613083 1904 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 SNORA27.1-201ENST00000362604 124 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU4-9P-201ENST00000364951 139 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-117P-201ENST00000365415 107 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU4-30P-201ENST00000410245 143 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-447P-201ENST00000410293 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-355P-201ENST00000410427 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-791P-201ENST00000410467 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-705P-201ENST00000410601 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-860P-201ENST00000410860 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-785P-201ENST00000411324 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 MTCO2P21-201ENST00000419780 677 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AC090844.1-201ENST00000422019 156 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 Z82188.1-201ENST00000436709 154 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 SNORA18.4-201ENST00000516440 124 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 SNORD45.4-201ENST00000516629 73 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-107P-201ENST00000516643 102 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-410P-201ENST00000517006 107 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 UBL5P4-201ENST00000562584 236 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AC138869.1-201ENST00000568623 124 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 U6.90-201ENST00000614007 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AC022306.3-201ENST00000619930 550 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 U6.70-201ENST00000620287 104 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 AC009878.1-201ENST00000621819 340 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 SEPT14P19-203ENST00000633205 211 ntBASIC-0.64□□□□□ -2.51
VPS25Q9BRG1 RNU6-157P-201ENST00000383957 107 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 MIR125B2-201ENST00000385128 89 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 SNORA26.5-201ENST00000391215 123 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 MLLT10P1-201ENST00000418346 262 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 RNU7-62P-201ENST00000458856 62 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 RNU7-167P-201ENST00000459160 62 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 PRDX4P1-201ENST00000507189 574 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 SNORD27.1-201ENST00000516319 72 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 RNU6-448P-201ENST00000517052 107 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 RNU7-156P-201ENST00000517214 74 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 AC005730.3-201ENST00000583067 366 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 MIR4645-201ENST00000583158 77 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 MIR4762-201ENST00000585261 75 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 RNU1-29P-201ENST00000606574 126 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 MIR8064-201ENST00000612863 90 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 AC010608.3-201ENST00000625048 527 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 MTND1P7-201ENST00000632801 297 ntBASIC-0.65□□□□□ -2.51
VPS25Q9BRG1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.66□□□□□ -2.51
VPS25Q9BRG1 RNU6-161P-201ENST00000363051 106 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 RNU4-68P-201ENST00000364314 141 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 RNU6-195P-201ENST00000411352 109 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 MTCO2P27-201ENST00000420740 428 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AL512326.2-201ENST00000426359 151 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AL365184.2-201ENST00000431139 435 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 SNRPGP10-201ENST00000432323 225 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AC087499.4-201ENST00000448505 178 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 ZNF114P1-201ENST00000453500 292 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AC091959.1-201ENST00000495857 238 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 RNA5SP54-201ENST00000516951 92 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AC018448.1-201ENST00000552843 316 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 SNORD92-201ENST00000585078 85 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 uc_338.36-201ENST00000622331 158 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 AC127459.3-201ENST00000624328 466 ntBASIC-0.66□□□□□ -2.52
VPS25Q9BRG1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms