Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 RPS20P10-201ENST00000451209 253 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.34□□□□□ -2.36
VAT1Q99536 MTND5P16-201ENST00000460269 1703 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.34□□□□□ -2.36
VAT1Q99536 RNU7-41P-201ENST00000515917 61 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 RNA5SP220-201ENST00000516298 104 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.34□□□□□ -2.36
VAT1Q99536 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.34□□□□□ -2.36
VAT1Q99536 AC145350.1-201ENST00000567426 208 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.34□□□□□ -2.36
VAT1Q99536 Z83818.1-201ENST00000603584 150 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 RNU6-94P-201ENST00000607728 107 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
VAT1Q99536 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
VAT1Q99536 RNU6-1252P-201ENST00000363054 104 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 RNU6-117P-201ENST00000365415 107 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 RNU6-1297P-201ENST00000384415 104 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 MIR520G-201ENST00000385064 90 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.33□□□□□ -2.36
VAT1Q99536 AC243428.1-201ENST00000421099 264 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.33□□□□□ -2.36
VAT1Q99536 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.33□□□□□ -2.36
VAT1Q99536 AC046134.1-201ENST00000514454 666 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 RNU7-175P-201ENST00000515915 61 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 RNU6-1278P-201ENST00000516130 107 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 RNU6-405P-201ENST00000516637 110 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 AC036111.3-201ENST00000526389 112 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 AC023442.1-201ENST00000531247 422 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 ZNF519P2-201ENST00000557032 169 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 MIR4711-201ENST00000578274 70 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 MIR3684-201ENST00000579779 74 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 AC019193.3-201ENST00000609144 554 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 AC127459.3-201ENST00000624328 466 ntBASIC0.33□□□□□ -2.36
VAT1Q99536 Y_RNA.373-201ENST00000365600 103 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 Y_RNA.405-201ENST00000383979 100 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 Y_RNA.451-201ENST00000384200 100 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 Y_RNA.524-201ENST00000384564 100 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 RNU6-136P-201ENST00000384663 107 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 Y_RNA.561-201ENST00000384694 100 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 MIR452-201ENST00000385020 85 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 MIR1298-201ENST00000408783 112 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 RNU6-1068P-201ENST00000410958 103 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 RNA5SP222-201ENST00000411039 105 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 AC114811.1-201ENST00000507207 168 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 RN7SKP164-201ENST00000516138 266 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 RNU6-1096P-201ENST00000517089 102 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.32□□□□□ -2.36
VAT1Q99536 AC119751.7-201ENST00000600494 245 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 AL138726.1-201ENST00000614873 333 ntBASIC0.32□□□□□ -2.36
VAT1Q99536 Y_RNA.226-201ENST00000364337 114 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 RNU6-1264P-201ENST00000383891 107 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 MIR520C-201ENST00000385005 87 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 ELOCP21-201ENST00000412558 336 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 MTND3P23-201ENST00000431980 347 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 MTATP6P13-201ENST00000438531 667 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AC067940.1-201ENST00000458411 300 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.31□□□□□ -2.36
VAT1Q99536 Y_RNA.665-201ENST00000516177 98 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 RN7SKP12-201ENST00000516275 143 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 SNORA74.3-201ENST00000517108 154 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AL158211.1-201ENST00000566763 763 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 MIR4760-201ENST00000585040 80 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AC092954.2-201ENST00000609103 430 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AL136317.1-201ENST00000612653 226 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AC023510.2-201ENST00000622162 746 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AL391262.2-201ENST00000622466 494 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 AC073544.1-201ENST00000600110 1595 ntBASIC0.31□□□□□ -2.36
VAT1Q99536 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
VAT1Q99536 SNORD68-201ENST00000363214 84 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 RNY1P8-201ENST00000383970 114 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 SNORA36.2-201ENST00000384004 127 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 Y_RNA.533-201ENST00000384596 114 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 RNU1-139P-201ENST00000391307 165 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 SNORD111-201ENST00000408139 94 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 Y_RNA.615-201ENST00000410769 117 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.3□□□□□ -2.36
VAT1Q99536 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.3□□□□□ -2.36
VAT1Q99536 PCNPP5-201ENST00000452246 481 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 RNU6-1114P-201ENST00000516022 107 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 AF235103.2-201ENST00000525753 346 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 AC093023.1-201ENST00000547375 507 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 AC121247.2-201ENST00000604776 136 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 AC124303.1-201ENST00000605703 360 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 AC068137.3-201ENST00000639191 341 ntBASIC0.3□□□□□ -2.36
VAT1Q99536 RNU6-222P-201ENST00000362438 107 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 RNU6-1085P-201ENST00000363576 107 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 Y_RNA.359-201ENST00000365498 102 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 RNU6-42P-201ENST00000384165 107 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 MIR1287-201ENST00000408492 90 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 MRPS18CP6-201ENST00000423587 223 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
VAT1Q99536 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms