Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 U8.17-201ENST00000391292 132 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 AC107083.1-201ENST00000439643 279 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 RN7SKP43-201ENST00000516173 320 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 MIR4672-201ENST00000583126 81 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 AC091167.4-201ENST00000605079 184 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHOX2BQ99453 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHOX2BQ99453 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PHOX2BQ99453 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PHOX2BQ99453 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PHOX2BQ99453 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PHOX2BQ99453 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PHOX2BQ99453 SNORA1B-201ENST00000362535 133 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 RNU6-1131P-201ENST00000364955 107 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 CD24P4-201ENST00000382840 243 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 RNY1P6-201ENST00000384193 109 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 SNORA8-201ENST00000384574 139 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 COTL1P1-201ENST00000422309 375 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 CST2P1-201ENST00000425770 87 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 AC087499.4-201ENST00000448505 178 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 ATP5J2P3-201ENST00000451550 258 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 AC006539.3-201ENST00000454258 129 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 RN7SL271P-201ENST00000487601 295 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 AC084364.2-201ENST00000546924 395 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 MIR3163-201ENST00000581592 73 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 MIR5684-201ENST00000585074 65 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 U6.108-201ENST00000637764 58 ntBASIC3.95□□□□□ -1.78
PHOX2BQ99453 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PHOX2BQ99453 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PHOX2BQ99453 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PHOX2BQ99453 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PHOX2BQ99453 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHOX2BQ99453 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PHOX2BQ99453 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHOX2BQ99453 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 RNU6-349P-201ENST00000362402 107 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 SNORA80A-201ENST00000363922 136 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 Y_RNA.298-201ENST00000364960 107 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 RNY4P29-201ENST00000410801 97 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 AC010401.1-201ENST00000463867 348 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 AC021205.2-201ENST00000480069 347 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 AC006064.5-201ENST00000541782 248 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.94□□□□□ -1.78
PHOX2BQ99453 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PHOX2BQ99453 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHOX2BQ99453 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHOX2BQ99453 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHOX2BQ99453 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PHOX2BQ99453 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 Y_RNA.37-201ENST00000362606 108 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 SNORD68-201ENST00000363214 84 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 RNU7-28P-201ENST00000516759 62 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 RNU6-667P-201ENST00000517186 102 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 AC007536.1-201ENST00000533382 349 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 MIR432-201ENST00000606207 94 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 MIR376A2-201ENST00000636782 80 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
PHOX2BQ99453 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PHOX2BQ99453 Z83843.1-201ENST00000604070 3685 ntBASIC3.93□□□□□ -1.78
PHOX2BQ99453 RNU1-89P-201ENST00000384592 164 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 RNA5SP482-201ENST00000391269 118 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 RNA5SP293-201ENST00000410527 113 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 SNORA74C-2-201ENST00000411179 201 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 AC017083.1-201ENST00000428093 483 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 AL445646.1-201ENST00000431784 216 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 RNU7-164P-201ENST00000459221 62 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.92□□□□□ -1.78
PHOX2BQ99453 MIR4644-201ENST00000579929 84 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 MIR3683-201ENST00000580847 82 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 MIR3616-201ENST00000584070 92 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PHOX2BQ99453 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.92□□□□□ -1.78
PHOX2BQ99453 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
PHOX2BQ99453 AC091152.2-201ENST00000591628 2569 ntBASIC3.92□□□□□ -1.78
PHOX2BQ99453 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PHOX2BQ99453 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PHOX2BQ99453 MIR449A-201ENST00000362113 91 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PHOX2BQ99453 SNORA51.10-201ENST00000384418 136 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 RNU6-160P-201ENST00000384591 107 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 RNU7-25P-201ENST00000516544 62 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 YPEL5P3-201ENST00000547227 352 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 AC110741.2-201ENST00000605278 268 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 CTSLP2-204ENST00000629029 392 ntBASIC3.91□□□□□ -1.78
PHOX2BQ99453 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms