Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 7SK.8-201ENST00000612110 250 ntBASIC0.96□□□□□ -2.26
COL21A1Q96P44 7SK.11-201ENST00000615477 250 ntBASIC0.96□□□□□ -2.26
COL21A1Q96P44 7SK.13-201ENST00000622040 250 ntBASIC0.96□□□□□ -2.26
COL21A1Q96P44 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.96□□□□□ -2.26
COL21A1Q96P44 ZNF204P-201ENST00000416749 2397 ntBASIC0.96□□□□□ -2.26
COL21A1Q96P44 MTND4P12-201ENST00000498999 1377 ntBASIC0.96□□□□□ -2.26
COL21A1Q96P44 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL21A1Q96P44 Y_RNA.142-201ENST00000363491 102 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 SNORA33-201ENST00000363664 130 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 U3.8-201ENST00000363675 217 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 SNORA4.2-201ENST00000365313 147 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 RNA5SP259-201ENST00000365541 109 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 Y_RNA.405-201ENST00000383979 100 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 Y_RNA.451-201ENST00000384200 100 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 RNU6-17P-201ENST00000384245 107 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 RNU6-18P-201ENST00000384527 107 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 Y_RNA.524-201ENST00000384564 100 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 Y_RNA.561-201ENST00000384694 100 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 SNORA75.4-201ENST00000391278 119 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.95□□□□□ -2.26
COL21A1Q96P44 MTND4P18-201ENST00000447010 465 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 Y_RNA.635-201ENST00000459041 101 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 RNU6-507P-201ENST00000516045 100 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 RNU6-277P-201ENST00000516272 106 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 RNU6-58P-201ENST00000517143 103 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.95□□□□□ -2.26
COL21A1Q96P44 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 AC092794.2-201ENST00000620933 563 ntBASIC0.95□□□□□ -2.26
COL21A1Q96P44 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
COL21A1Q96P44 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COL21A1Q96P44 RNU6-1266P-201ENST00000362794 105 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 Y_RNA.319-201ENST00000365138 92 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 RNU6-1031P-201ENST00000384773 107 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 MIR153-2-201ENST00000385225 87 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 RNU6-370P-201ENST00000411008 104 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 AL353997.1-201ENST00000432936 108 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 RNU6-120P-201ENST00000516077 103 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 RNU6-875P-201ENST00000516488 106 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 SCARNA16.2-201ENST00000516520 172 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 AL590705.4-201ENST00000532209 134 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.94□□□□□ -2.26
COL21A1Q96P44 APOOP3-201ENST00000536787 586 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 UBL5P4-201ENST00000562584 236 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.94□□□□□ -2.26
COL21A1Q96P44 MIR5701-3-201ENST00000578890 82 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 AP001094.1-201ENST00000579805 193 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 MIR5701-1-201ENST00000585138 82 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 MIR5701-2-201ENST00000615634 82 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 AL513423.1-201ENST00000621695 132 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 AL669831.3-213ENST00000636676 183 ntBASIC0.94□□□□□ -2.26
COL21A1Q96P44 RNU6-874P-201ENST00000362390 105 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNU6-222P-201ENST00000362438 107 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 Y_RNA.68-201ENST00000362881 102 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNU6-1188P-201ENST00000363795 107 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNU6-873P-201ENST00000363833 107 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 Y_RNA.251-201ENST00000364551 99 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 Y_RNA.490-201ENST00000384413 102 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNA5SP504-201ENST00000410676 117 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 Y_RNA.646-201ENST00000410980 101 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.93□□□□□ -2.26
COL21A1Q96P44 USMG5P1-201ENST00000425964 177 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.93□□□□□ -2.26
COL21A1Q96P44 MTND3P23-201ENST00000431980 347 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 MTATP6P23-201ENST00000440153 476 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.93□□□□□ -2.26
COL21A1Q96P44 MTND5P20-201ENST00000448677 143 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AP000870.1-201ENST00000472927 406 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RPS23P4-201ENST00000487908 423 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNU7-175P-201ENST00000515915 61 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 SNORD116-28-201ENST00000516123 91 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNU6-559P-201ENST00000516151 98 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 RNU7-40P-201ENST00000516397 64 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AC113139.1-201ENST00000605049 239 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AL132765.2-201ENST00000610812 351 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AC021506.2-201ENST00000612354 169 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AC104260.1-201ENST00000616660 539 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 PISRT1.1-201ENST00000616930 107 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 AC006435.5-201ENST00000624486 112 ntBASIC0.93□□□□□ -2.26
COL21A1Q96P44 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNA5SP327-201ENST00000362494 101 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNY1P16-201ENST00000363063 111 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 Y_RNA.106-201ENST00000363189 100 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU6-280P-201ENST00000364145 104 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU6-1080P-201ENST00000383982 107 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU6-310P-201ENST00000384655 107 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU6-541P-201ENST00000384709 110 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 MIR10B-201ENST00000385011 110 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU6-159P-201ENST00000391080 106 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNA5SP467-201ENST00000391274 118 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 RNU1-139P-201ENST00000391307 165 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 AL034345.1-201ENST00000407768 123 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 AC016909.1-201ENST00000415916 166 ntBASIC0.92□□□□□ -2.26
COL21A1Q96P44 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.92□□□□□ -2.26
COL21A1Q96P44 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.92□□□□□ -2.26
COL21A1Q96P44 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms