Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU7-12P-201ENST00000516030 62 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 RNU6-1291P-201ENST00000516591 104 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 RNU1-54P-201ENST00000517181 120 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 AP002004.2-201ENST00000531656 154 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 AP002001.1-203ENST00000534002 267 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 AL121579.1-201ENST00000555129 305 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 AC090617.3-201ENST00000573670 475 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 MIR6128-201ENST00000615528 109 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.84□□□□□ -2.27
RPRD1AQ96P16 AC100810.6-201ENST00000638068 285 ntBASIC0.84□□□□□ -2.27
RPRD1AQ96P16 AC073544.1-201ENST00000600110 1595 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.122-201ENST00000363331 96 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 RNU6-376P-201ENST00000384731 106 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 DLGAP5P1-201ENST00000430307 464 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 UQCRBP2-201ENST00000447827 297 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 SNORD5.1-201ENST00000458800 75 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.83□□□□□ -2.28
RPRD1AQ96P16 RNU6-566P-201ENST00000516790 107 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.83□□□□□ -2.28
RPRD1AQ96P16 AC011604.1-201ENST00000545978 196 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 AL357312.1-201ENST00000603879 298 ntBASIC0.83□□□□□ -2.28
RPRD1AQ96P16 RNY4P14-201ENST00000363656 96 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 RNU4-24P-201ENST00000364565 139 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 SNORA80D-201ENST00000384488 135 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.554-201ENST00000384672 102 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 MIR562-201ENST00000384894 95 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 RNA5SP482-201ENST00000391269 118 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 MTCYBP4-201ENST00000401524 249 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
RPRD1AQ96P16 RPL39P39-201ENST00000455840 151 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 PDCD5P2-201ENST00000507570 312 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.82□□□□□ -2.28
RPRD1AQ96P16 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 RNA5SP220-201ENST00000516298 104 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.82□□□□□ -2.28
RPRD1AQ96P16 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.82□□□□□ -2.28
RPRD1AQ96P16 MIR5701-3-201ENST00000578890 82 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 MIR5701-1-201ENST00000585138 82 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 MIR5701-2-201ENST00000615634 82 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 MIR3662-201ENST00000637030 95 ntBASIC0.82□□□□□ -2.28
RPRD1AQ96P16 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RPRD1AQ96P16 AC008163.1-202ENST00000636004 2889 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 RNA5SP361-201ENST00000362686 118 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.89-201ENST00000363031 102 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 RNU6-1145P-201ENST00000384246 107 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 RNY1P14-201ENST00000384426 108 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.508-201ENST00000384502 114 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 MIR190B-201ENST00000401119 79 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 RNU5A-5P-201ENST00000411054 116 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 AC009161.1-201ENST00000417306 376 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
RPRD1AQ96P16 MTND4LP16-201ENST00000440828 295 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 AL137792.2-201ENST00000443484 235 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 MTND2P22-201ENST00000444325 1033 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 MIR3684-201ENST00000579779 74 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 MIR151B-201ENST00000584249 96 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 AC005014.2-201ENST00000607795 599 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 AL096861.1-201ENST00000610899 123 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 MIR6788-201ENST00000618842 66 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 MIR6734-201ENST00000621166 68 ntBASIC0.81□□□□□ -2.28
RPRD1AQ96P16 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.81□□□□□ -2.28
RPRD1AQ96P16 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.9-201ENST00000362354 101 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 RNU6-874P-201ENST00000362390 105 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 RNU6-117P-201ENST00000365415 107 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RPRD1AQ96P16 RNU6-1013P-201ENST00000384180 107 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 MIR526A1-201ENST00000384897 85 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 Z83846.1-201ENST00000446798 265 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 snoU13.25-201ENST00000458945 104 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 RNU6-1116P-201ENST00000517269 99 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 SNORA4-201ENST00000584302 138 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 AC004832.4-201ENST00000608952 331 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 AC015540.1-201ENST00000615828 501 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
RPRD1AQ96P16 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.157-201ENST00000363638 102 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.301-201ENST00000364990 103 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.473-201ENST00000384333 102 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 SNORA75.2-201ENST00000391138 150 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 SNORA75.3-201ENST00000391231 150 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 MIR548J-201ENST00000408833 112 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 AC006461.1-201ENST00000412637 326 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 Z98949.2-201ENST00000440996 144 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.79□□□□□ -2.28
RPRD1AQ96P16 PCNPP5-201ENST00000452246 481 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 RNU7-21P-201ENST00000459430 62 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 RNU6-1278P-201ENST00000516130 107 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 AC018448.1-201ENST00000552843 316 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms