Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MIR4753-201ENST00000585119 83 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 SCARNA15.3-201ENST00000626315 122 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 SCARNA4.1-201ENST00000628597 123 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.24-201ENST00000362508 103 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 RNU6-944P-201ENST00000364023 107 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 snoU2_19.4-201ENST00000364329 80 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.361-201ENST00000365515 120 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 MIR626-201ENST00000385032 94 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 MIR300-201ENST00000401138 83 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 MIR1283-1-201ENST00000408494 87 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 RNU7-57P-201ENST00000459540 60 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 RN7SKP164-201ENST00000516138 266 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 MIR3684-201ENST00000579779 74 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 AC025754.2-201ENST00000606491 432 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 AC069294.1-201ENST00000608397 350 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 MIR6840-201ENST00000611937 71 ntBASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
PDLIM2Q96JY6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 RNU6-1205P-201ENST00000363625 106 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 RNU4-84P-201ENST00000364200 139 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 RNU6-275P-201ENST00000364910 107 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 SNORD113-1-201ENST00000365321 69 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 RNU4-52P-201ENST00000384209 138 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.572-201ENST00000384757 98 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AL355497.1-201ENST00000406262 551 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC063976.3-201ENST00000426849 329 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC104389.3-201ENST00000445629 235 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC074290.1-201ENST00000448883 135 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AL021397.1-201ENST00000451806 248 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 RNU7-141P-201ENST00000459304 62 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC025033.1-201ENST00000463883 194 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 RNU6-586P-201ENST00000517265 104 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 MIR4744-201ENST00000581563 82 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.802-201ENST00000614892 130 ntBASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PDLIM2Q96JY6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 ZNF658B-202ENST00000615961 3375 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.111-201ENST00000363248 100 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.124-201ENST00000363339 93 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 RNU6-103P-201ENST00000363686 107 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.291-201ENST00000364886 113 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 RNU6-234P-201ENST00000365229 104 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 EBAG9P1-201ENST00000418955 543 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 HSPE1P21-201ENST00000438283 308 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 AC114982.1-201ENST00000469402 321 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 AC005840.1-201ENST00000498412 377 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 AC109329.2-201ENST00000519658 482 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 AC002984.1-201ENST00000591692 448 ntBASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM2Q96JY6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.172-201ENST00000363765 102 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.343-201ENST00000365354 112 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 RNU6-969P-201ENST00000383900 105 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.400-201ENST00000383963 111 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 SNORA20B-201ENST00000384220 132 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.488-201ENST00000384403 102 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.510-201ENST00000384511 114 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 MIR218-1-201ENST00000384999 110 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 RNU6-578P-201ENST00000390980 103 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 AL355796.1-201ENST00000406706 323 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 AL109933.2-201ENST00000452651 260 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 ATP5EP1-201ENST00000510257 156 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 MIR548AI-201ENST00000579940 88 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 AL713866.2-201ENST00000603579 219 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 AC009831.4-201ENST00000620744 325 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 snoZ196.1-201ENST00000625269 89 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 MIR7515-201ENST00000637837 67 ntBASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM2Q96JY6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PDLIM2Q96JY6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
PDLIM2Q96JY6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM2Q96JY6 RNU1-72P-201ENST00000362976 153 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms