Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MIR520A-201ENST00000384862 85 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 MTND5P22-201ENST00000458380 195 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 MTATP8P1-201ENST00000467115 207 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 UBE2DNL-203ENST00000474922 222 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 TRBV12-1-201ENST00000479785 344 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.92□□□□□ -2.1
CNOT9Q92600 RNU6-1143P-201ENST00000516125 104 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 RNU6-496P-201ENST00000516145 99 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.92□□□□□ -2.1
CNOT9Q92600 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.92□□□□□ -2.1
CNOT9Q92600 AC010900.2-201ENST00000604508 210 ntBASIC1.92□□□□□ -2.1
CNOT9Q92600 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
CNOT9Q92600 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.91□□□□□ -2.1
CNOT9Q92600 Y_RNA.64-201ENST00000362845 102 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 Y_RNA.162-201ENST00000363683 102 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 RNU6-102P-201ENST00000384485 104 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 AL731563.1-201ENST00000442202 214 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.91□□□□□ -2.1
CNOT9Q92600 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 AC098869.1-201ENST00000481627 292 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 RPL23AP63-201ENST00000498752 471 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 RNU6-327P-201ENST00000516270 127 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 SNORA31.17-201ENST00000516953 127 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 RNA5SP437-201ENST00000517249 129 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 AC022254.1-201ENST00000567857 235 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 DEFB117-201ENST00000602356 141 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 AC073413.2-201ENST00000604332 360 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 AC127459.3-201ENST00000624328 466 ntBASIC1.91□□□□□ -2.1
CNOT9Q92600 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CNOT9Q92600 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CNOT9Q92600 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.1
CNOT9Q92600 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.9□□□□□ -2.11
CNOT9Q92600 AL356292.1-201ENST00000283110 373 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 RNU6-117P-201ENST00000365415 107 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 Y_RNA.581-201ENST00000391017 97 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 RNU6-1109P-201ENST00000391187 107 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 MIR548F4-201ENST00000408515 105 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 RPL21P38-201ENST00000418090 167 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 Z98742.3-201ENST00000418637 326 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 MTND2P23-201ENST00000422990 651 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 AC010154.1-201ENST00000425857 269 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 HSPE1P13-201ENST00000451143 297 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 HSPE1P25-201ENST00000455484 251 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.9□□□□□ -2.11
CNOT9Q92600 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.9□□□□□ -2.11
CNOT9Q92600 AC136443.5-201ENST00000603741 370 ntBASIC1.9□□□□□ -2.11
CNOT9Q92600 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
CNOT9Q92600 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
CNOT9Q92600 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
CNOT9Q92600 RNU4-90P-201ENST00000362773 141 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 snoU2_19.2-201ENST00000363024 80 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 Y_RNA.222-201ENST00000364264 102 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 Y_RNA.383-201ENST00000383855 97 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 Y_RNA.459-201ENST00000384251 102 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 SNORA64-201ENST00000384674 134 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 RNA5SP109-201ENST00000391010 116 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 SNORA3.2-201ENST00000408221 125 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 RNU2-7P-201ENST00000410794 178 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 AL356320.1-201ENST00000429616 163 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 POLR2KP2-201ENST00000438155 177 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 DYNLT3P2-201ENST00000442517 295 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 RNU6-1278P-201ENST00000516130 107 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 RNU6-1337P-201ENST00000516525 95 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 RNU6-635P-201ENST00000516651 102 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 IGKV3-31-201ENST00000523109 329 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 AP003733.2-201ENST00000529409 171 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 RPL21P9-201ENST00000556149 474 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 AC002984.1-201ENST00000591692 448 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 AC022217.4-201ENST00000604389 163 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
CNOT9Q92600 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CNOT9Q92600 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CNOT9Q92600 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.88□□□□□ -2.11
CNOT9Q92600 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.88□□□□□ -2.11
CNOT9Q92600 RNU6-376P-201ENST00000384731 106 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 MIR215-201ENST00000384858 110 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.88□□□□□ -2.11
CNOT9Q92600 AL606517.2-201ENST00000442855 241 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 RPS27P1-201ENST00000450552 247 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 RNU6-63P-201ENST00000516690 95 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.88□□□□□ -2.11
CNOT9Q92600 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.88□□□□□ -2.11
CNOT9Q92600 AL117187.1-201ENST00000555482 181 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
CNOT9Q92600 MIR3145-201ENST00000580727 82 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 PRR13P7-201ENST00000605538 430 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 AL590808.1-201ENST00000618696 141 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 AC018630.2-201ENST00000534866 2403 ntBASIC1.88□□□□□ -2.11
CNOT9Q92600 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CNOT9Q92600 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms