Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MIR29B2-201ENST00000385055 81 ntBASIC5.45□□□□□ -1.54
TRIM41Q8WV44 MIR1294-201ENST00000408503 142 ntBASIC5.45□□□□□ -1.54
TRIM41Q8WV44 HMGN2P16-201ENST00000456802 261 ntBASIC5.45□□□□□ -1.54
TRIM41Q8WV44 RPS29P21-201ENST00000496272 170 ntBASIC5.45□□□□□ -1.54
TRIM41Q8WV44 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM41Q8WV44 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM41Q8WV44 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM41Q8WV44 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM41Q8WV44 RNU6-294P-201ENST00000364999 102 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 RNA5SP354-201ENST00000391247 136 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 HMGN2P32-201ENST00000444648 269 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 RNU7-149P-201ENST00000516739 59 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 RN7SKP282-201ENST00000516824 299 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 RNU6-1231P-201ENST00000517185 103 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 IGKV1-22-201ENST00000524313 326 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 AC097639.2-201ENST00000603159 172 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 AL353997.5-201ENST00000618886 171 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 AC002546.1-201ENST00000588041 2504 ntBASIC5.44□□□□□ -1.54
TRIM41Q8WV44 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM41Q8WV44 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM41Q8WV44 RNU6-756P-201ENST00000383997 107 ntBASIC5.43□□□□□ -1.54
TRIM41Q8WV44 RNU6-905P-201ENST00000384434 107 ntBASIC5.43□□□□□ -1.54
TRIM41Q8WV44 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM41Q8WV44 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM41Q8WV44 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TRIM41Q8WV44 AL133412.1-201ENST00000380194 2992 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 RNU6-1209P-201ENST00000363655 107 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 U8.6-201ENST00000364939 135 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 MIR624-201ENST00000385217 97 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 SNORD12C-201ENST00000386307 89 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 MIR891A-201ENST00000401237 79 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 AC097463.2-201ENST00000421074 142 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 AF228730.3-201ENST00000436691 102 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 AC018630.3-201ENST00000542637 96 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 AC007012.1-201ENST00000567192 175 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM41Q8WV44 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC5.42□□□□□ -1.54
TRIM41Q8WV44 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM41Q8WV44 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM41Q8WV44 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM41Q8WV44 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM41Q8WV44 RNU6-1131P-201ENST00000364955 107 ntBASIC5.41□□□□□ -1.54
TRIM41Q8WV44 SNORA26.2-201ENST00000390922 122 ntBASIC5.41□□□□□ -1.54
TRIM41Q8WV44 SNORD72-201ENST00000390994 80 ntBASIC5.41□□□□□ -1.54
TRIM41Q8WV44 AL139132.1-201ENST00000431587 344 ntBASIC5.41□□□□□ -1.54
TRIM41Q8WV44 SNORD11-201ENST00000459124 84 ntBASIC5.41□□□□□ -1.54
TRIM41Q8WV44 OR9P1P-201ENST00000496431 281 ntBASIC5.41□□□□□ -1.54
TRIM41Q8WV44 MIR3129-201ENST00000581095 76 ntBASIC5.41□□□□□ -1.54
TRIM41Q8WV44 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM41Q8WV44 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM41Q8WV44 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM41Q8WV44 Y_RNA.281-201ENST00000364774 94 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 RNU6-418P-201ENST00000384035 107 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 Y_RNA.486-201ENST00000384398 107 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 EIF4EP4-201ENST00000424916 578 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 CST9LP2-201ENST00000437612 320 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 RPS4XP11-201ENST00000446897 772 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 ATP5EP1-201ENST00000510257 156 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 AC096725.1-201ENST00000514266 313 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 RNU6-365P-201ENST00000517113 106 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 IGKV1OR2-6-201ENST00000603485 277 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 uc_338.14-201ENST00000613162 166 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 JPX_2.1-201ENST00000614161 69 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.4□□□□□ -1.54
TRIM41Q8WV44 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM41Q8WV44 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM41Q8WV44 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM41Q8WV44 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM41Q8WV44 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRIM41Q8WV44 AL596211.1-201ENST00000569873 2277 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 SNORA9.2-201ENST00000365361 133 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 RNU6-117P-201ENST00000365415 107 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 SNORA51.5-201ENST00000384126 131 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 AL590004.2-201ENST00000404787 371 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 AC022018.1-201ENST00000430685 241 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
TRIM41Q8WV44 MIR4781-201ENST00000585250 76 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 uc_338.25-201ENST00000613756 156 ntBASIC5.39□□□□□ -1.55
TRIM41Q8WV44 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM41Q8WV44 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM41Q8WV44 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM41Q8WV44 RNU6-766P-201ENST00000362478 107 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 RNU6-234P-201ENST00000365229 104 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 Y_RNA.348-201ENST00000365403 103 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM41Q8WV44 AC025647.1-201ENST00000517879 253 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 AC007751.1-201ENST00000529260 376 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 MIR4662B-201ENST00000579498 81 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 UBL5P2-201ENST00000583788 219 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 MIR3117-201ENST00000584034 78 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 AC002064.3-201ENST00000623448 346 ntBASIC5.38□□□□□ -1.55
TRIM41Q8WV44 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
TRIM41Q8WV44 AC000403.1-201ENST00000613696 3585 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM41Q8WV44 RNU6-640P-201ENST00000363693 105 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 Y_RNA.163-201ENST00000363702 113 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 SNORA7.4-201ENST00000384249 137 ntBASIC5.37□□□□□ -1.55
TRIM41Q8WV44 MIR1302-5-201ENST00000408164 150 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms