Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CCDC89Q8N998 Y_RNA.243-201ENST00000364481 109 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 SNORD41-201ENST00000386967 70 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 MTND1P4-201ENST00000435196 415 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 AC233266.1-201ENST00000454518 96 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 RNU6-917P-201ENST00000516294 104 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 AP002001.1-203ENST00000534002 267 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 AC242852.1-201ENST00000612151 96 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 MIR1244-1-201ENST00000612829 85 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 AC244015.1-201ENST00000622301 99 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 MIR1244-3-201ENST00000635744 85 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 MIR1244-2-201ENST00000636449 85 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 MIR1244-4-202ENST00000636813 85 ntBASIC1.31□□□□□ -2.2
CCDC89Q8N998 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC89Q8N998 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC89Q8N998 RNU4-79P-201ENST00000362764 141 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 RNU6-117P-201ENST00000365415 107 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 RNU6-910P-201ENST00000390844 107 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 FGF7P6-202ENST00000451282 293 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 AC093850.1-201ENST00000454121 251 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 RN7SKP179-201ENST00000516126 217 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 HSPE1P19-201ENST00000603327 295 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 AC084782.3-201ENST00000612282 578 ntBASIC1.3□□□□□ -2.2
CCDC89Q8N998 RNU6-1301P-201ENST00000362724 104 ntBASIC1.29□□□□□ -2.2
CCDC89Q8N998 RNU1-17P-201ENST00000363022 152 ntBASIC1.29□□□□□ -2.2
CCDC89Q8N998 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
CCDC89Q8N998 AC245047.7-201ENST00000440265 293 ntBASIC1.29□□□□□ -2.2
CCDC89Q8N998 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
CCDC89Q8N998 RNU6-1096P-201ENST00000517089 102 ntBASIC1.29□□□□□ -2.2
CCDC89Q8N998 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CCDC89Q8N998 AC080078.3-201ENST00000605407 463 ntBASIC1.29□□□□□ -2.2
CCDC89Q8N998 AC012676.2-201ENST00000619258 186 ntBASIC1.29□□□□□ -2.2
CCDC89Q8N998 RNU6-99P-201ENST00000364721 107 ntBASIC1.28□□□□□ -2.2
CCDC89Q8N998 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
CCDC89Q8N998 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
CCDC89Q8N998 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC89Q8N998 RNU6-264P-201ENST00000517134 104 ntBASIC1.28□□□□□ -2.2
CCDC89Q8N998 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
CCDC89Q8N998 MIRLET7C-201ENST00000362160 84 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 RNU6-845P-201ENST00000362578 103 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 Y_RNA.124-201ENST00000363339 93 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 RNU6-136P-201ENST00000384663 107 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 MIR625-201ENST00000385047 85 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 MTND4P28-201ENST00000426217 387 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC89Q8N998 Y_RNA.635-201ENST00000459041 101 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC89Q8N998 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC89Q8N998 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 AC005858.4-201ENST00000623191 700 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 AC139792.2-201ENST00000624218 587 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 AL669831.3-213ENST00000636676 183 ntBASIC1.27□□□□□ -2.21
CCDC89Q8N998 Y_RNA.577-201ENST00000384794 101 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 MIR19B1-201ENST00000384829 87 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 SNORA69.1-201ENST00000390904 137 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 RNU6-192P-201ENST00000391253 100 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 AL591806.2-201ENST00000433122 173 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 UBL5P1-201ENST00000507979 193 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 RNU6-408P-201ENST00000515910 100 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 SNORA70.12-201ENST00000516084 153 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC89Q8N998 AL117336.2-201ENST00000602435 335 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 AC080078.2-201ENST00000603766 501 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.26□□□□□ -2.21
CCDC89Q8N998 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC89Q8N998 CASC19-280ENST00000642102 1351 ntBASIC1.25□□□□□ -2.21
CCDC89Q8N998 AL391516.1-201ENST00000554380 2449 ntBASIC1.25□□□□□ -2.21
CCDC89Q8N998 RNU4-41P-201ENST00000364426 143 ntBASIC1.25□□□□□ -2.21
CCDC89Q8N998 MIR891A-201ENST00000401237 79 ntBASIC1.25□□□□□ -2.21
CCDC89Q8N998 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC89Q8N998 Z98949.2-201ENST00000440996 144 ntBASIC1.25□□□□□ -2.21
CCDC89Q8N998 Y_RNA.691-201ENST00000516611 103 ntBASIC1.25□□□□□ -2.21
CCDC89Q8N998 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC89Q8N998 AC004467.1-201ENST00000615678 330 ntBASIC1.25□□□□□ -2.21
CCDC89Q8N998 RNU6-833P-201ENST00000363486 107 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 Y_RNA.166-201ENST00000363730 102 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 AC063976.4-201ENST00000421971 163 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC89Q8N998 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC89Q8N998 AC104332.1-201ENST00000440471 797 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 LINC01399-202ENST00000458450 244 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC89Q8N998 RNU6-63P-201ENST00000516690 95 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC89Q8N998 MIR5690-201ENST00000583739 73 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 AC006380.1-201ENST00000603598 186 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 AC098679.4-201ENST00000624241 654 ntBASIC1.24□□□□□ -2.21
CCDC89Q8N998 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CCDC89Q8N998 Y_RNA.160-201ENST00000363677 92 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 Y_RNA.279-201ENST00000364763 95 ntBASIC1.23□□□□□ -2.21
CCDC89Q8N998 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms