Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 RNU6-443P-201ENST00000384780 107 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 MIR7-3-201ENST00000384898 110 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 MIR522-201ENST00000385071 87 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 SNRPGP13-201ENST00000442212 177 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 AL049830.1-201ENST00000468034 425 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 RNU5E-3P-201ENST00000515913 68 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 RNU6-113P-201ENST00000516653 101 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 AL161756.2-201ENST00000604597 246 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 AC091167.4-201ENST00000605079 184 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 AL591926.4-201ENST00000616895 298 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 AL136360.1-201ENST00000503377 1900 ntBASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
DEPDC4Q8N2C3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 MIR483-201ENST00000385070 76 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 MIR1262-201ENST00000408276 93 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 AL445687.1-201ENST00000439946 251 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 CYCTP-201ENST00000504253 315 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 RN7SKP19-201ENST00000516016 252 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 RNA5SP236-201ENST00000516169 116 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 SNORD33.1-201ENST00000516213 88 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 MIR4762-201ENST00000585261 75 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 Z83843.1-201ENST00000604070 3685 ntBASIC3.45□□□□□ -1.86
DEPDC4Q8N2C3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 SNORA1B-201ENST00000362535 133 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 U8.5-201ENST00000364528 136 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 SNORA3.3-201ENST00000408712 125 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 Y_RNA.630-201ENST00000411370 108 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 Y_RNA.651-201ENST00000459380 103 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 RNA5SP164-201ENST00000516533 110 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 YPEL5P3-201ENST00000547227 352 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 MIR7153-201ENST00000637758 57 ntBASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
DEPDC4Q8N2C3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 MIR627-201ENST00000384979 97 ntBASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 AL021397.1-201ENST00000451806 248 ntBASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 RNU6-693P-201ENST00000516134 107 ntBASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 RNA5SP208-201ENST00000516156 78 ntBASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 AC004832.5-201ENST00000608677 401 ntBASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 AC012442.3-202ENST00000636742 206 ntBASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DEPDC4Q8N2C3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 SNORA63.4-201ENST00000362763 126 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 SNORA33-201ENST00000363664 130 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 SNORA9-201ENST00000384215 133 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 MIR548A2-201ENST00000384956 97 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 MIR548A3-201ENST00000385297 97 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 AC063976.4-201ENST00000421971 163 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 RN7SL323P-201ENST00000494712 295 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 AC096725.1-201ENST00000514266 313 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 Y_RNA.666-201ENST00000516187 112 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 RNU6-1270P-201ENST00000517128 108 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 AC108081.1-201ENST00000604358 221 ntBASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
DEPDC4Q8N2C3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 RNA5SP119-201ENST00000362715 117 ntBASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 RNA5SP493-201ENST00000364115 91 ntBASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 RNA5SP424-201ENST00000390988 115 ntBASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 AL163195.1-201ENST00000496941 348 ntBASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 MTND5P32-201ENST00000560711 1802 ntBASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DEPDC4Q8N2C3 RNU6-508P-201ENST00000363231 103 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 SNORD116-21-201ENST00000384507 92 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 SNORD77.3-201ENST00000391113 65 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms