Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 Y_RNA.509-201ENST00000384506 99 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 RNA5SP109-201ENST00000391010 116 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 AL355796.1-201ENST00000406706 323 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 SNRPGP13-201ENST00000442212 177 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 MRPS10P1-201ENST00000448483 130 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 AC024995.1-201ENST00000523014 93 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 C8orf59P2-201ENST00000603441 271 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 AC006157.1-201ENST00000611750 366 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 U6.73-201ENST00000619194 103 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 U6.92-201ENST00000636464 89 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 U6.108-201ENST00000637764 58 ntBASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC60Q8IWA6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AL391987.6-201ENST00000305671 199 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 RNU6-414P-201ENST00000363705 104 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 RNU6-454P-201ENST00000364292 107 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.252-201ENST00000364556 101 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.813-201ENST00000364639 102 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 SNORA4.2-201ENST00000365313 147 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.431-201ENST00000384086 102 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 RNU6-911P-201ENST00000516523 104 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AC055872.1-201ENST00000570978 278 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 MIR4659A-201ENST00000580269 81 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AL080274.1-201ENST00000605565 220 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AL050343.2-201ENST00000607338 280 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AC004467.1-201ENST00000615678 330 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
CCDC60Q8IWA6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 MIR410-201ENST00000362222 80 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.27-201ENST00000362540 103 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.80-201ENST00000362996 102 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RNU6-1310P-201ENST00000384153 107 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 Y_RNA.485-201ENST00000384395 102 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 MTCO3P19-201ENST00000415864 321 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RNU7-34P-201ENST00000459394 64 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RPL26P26-201ENST00000480251 434 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 AC025465.3-201ENST00000510570 311 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RNU6-1012P-201ENST00000516606 109 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RNU4-77P-201ENST00000516692 156 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RNA5SP481-201ENST00000516814 122 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 MIR8074-201ENST00000615081 81 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 AC090971.5-201ENST00000621102 293 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 AC091925.1-201ENST00000623204 462 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 AC006435.5-201ENST00000624486 112 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 U6.115-201ENST00000636045 103 ntBASIC1.53□□□□□ -2.16
CCDC60Q8IWA6 RNU1-115P-201ENST00000365329 160 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 RNU6-308P-201ENST00000390957 107 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 MIR1267-201ENST00000408723 78 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC018865.2-201ENST00000423631 129 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AL160004.2-201ENST00000432935 350 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AL606517.2-201ENST00000442855 241 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 snoU13.27-201ENST00000459278 104 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 TRMT112P2-201ENST00000512910 132 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 RNU7-99P-201ENST00000516271 62 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 RNU7-128P-201ENST00000517247 62 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 MIR5188-201ENST00000583467 113 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC073413.2-201ENST00000604332 360 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC007485.1-201ENST00000616755 206 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC090574.1-201ENST00000623186 233 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AL606534.2-204ENST00000635008 178 ntBASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC60Q8IWA6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 AC100821.1-201ENST00000523153 2479 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 Y_RNA.61-201ENST00000362835 102 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 Y_RNA.124-201ENST00000363339 93 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RNU6-338P-201ENST00000383888 105 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RNU6-20P-201ENST00000384106 107 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RNY1P14-201ENST00000384426 108 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RPL21P1-201ENST00000399532 476 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RN7SKP51-201ENST00000410781 304 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 MTND1P14-201ENST00000427400 950 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 AC112492.4-201ENST00000456549 352 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RNU1-123P-201ENST00000458950 160 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 AC097462.1-201ENST00000514125 324 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RNA5SP20-201ENST00000515976 84 ntBASIC1.51□□□□□ -2.17
CCDC60Q8IWA6 RNU7-172P-201ENST00000517125 64 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms