Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-626P-201ENST00000363354 107 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 Y_RNA.230-201ENST00000364348 109 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 RNU11-5P-201ENST00000391216 129 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 MIR873-201ENST00000401120 77 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 AC005002.2-201ENST00000438228 269 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 RPS27P1-201ENST00000450552 247 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 snoU13.27-201ENST00000459278 104 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 AC093852.1-201ENST00000503587 266 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 RNA5SP20-201ENST00000515976 84 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 AC055872.1-201ENST00000570978 278 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 AC005176.2-201ENST00000596933 147 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 AC006380.1-201ENST00000603598 186 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 AC011476.5-201ENST00000615594 130 ntBASIC1.59□□□□□ -2.15
NUP54Q7Z3B4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
NUP54Q7Z3B4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.59□□□□□ -2.16
NUP54Q7Z3B4 AC006026.1-201ENST00000444025 1803 ntBASIC1.59□□□□□ -2.16
NUP54Q7Z3B4 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.16
NUP54Q7Z3B4 RNU1-22P-201ENST00000363334 158 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 RNU6-407P-201ENST00000365280 104 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 RNU6-20P-201ENST00000384106 107 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.445-201ENST00000384168 102 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 RNU6-950P-201ENST00000384651 107 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 RNA5SP109-201ENST00000391010 116 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 MIR1302-11-201ENST00000408051 138 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 MIR1302-9-201ENST00000408365 138 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 MIR1302-10-201ENST00000408734 138 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 MCFD2P1-201ENST00000417812 300 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 AL591806.2-201ENST00000433122 173 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 RNU7-94P-201ENST00000459576 63 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 RNU6-902P-201ENST00000517212 91 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 SNORA77B-201ENST00000578179 125 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 AC022217.4-201ENST00000604389 163 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 AL121655.1-201ENST00000605811 308 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 MIR1302-2-201ENST00000607096 138 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 AC007485.1-201ENST00000616755 206 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 AL161722.3-201ENST00000605789 2983 ntBASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
NUP54Q7Z3B4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 SNORD115-30-201ENST00000364117 82 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 RNU2-54P-201ENST00000410299 190 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 COX6CP10-201ENST00000416832 224 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 CYCSP49-201ENST00000420810 319 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 AC010154.1-201ENST00000425857 269 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 snoU13.23-201ENST00000458863 104 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 RPS26P55-201ENST00000471178 356 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 RNU7-172P-201ENST00000517125 64 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 RN7SKP295-201ENST00000517264 153 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 AP001485.1-201ENST00000604799 199 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 MIR6715A-201ENST00000615929 79 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 AL121890.5-201ENST00000620848 304 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 AC100821.1-201ENST00000523153 2479 ntBASIC1.57□□□□□ -2.16
NUP54Q7Z3B4 AC018630.2-201ENST00000534866 2403 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 AC005592.1-201ENST00000566527 1640 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 SNORA4.2-201ENST00000365313 147 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.485-201ENST00000384395 102 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 RPL21P1-201ENST00000399532 476 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 AL606517.2-201ENST00000442855 241 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 MTND4P19-201ENST00000446659 478 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 MIR4709-201ENST00000577272 72 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 MIR8063-201ENST00000621930 81 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 MTND4P29-201ENST00000503122 1372 ntBASIC1.56□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.128-201ENST00000363391 112 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 RNU4-50P-201ENST00000364361 141 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.462-201ENST00000384268 102 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AL627390.1-201ENST00000396055 340 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 MRPL42P3-201ENST00000401492 326 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 PMCHL1-202ENST00000423102 261 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AC245047.3-201ENST00000429428 127 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 SNORA25.10-201ENST00000515926 124 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 SNORA70.12-201ENST00000516084 153 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 Y_RNA.713-201ENST00000517013 96 ntBASIC1.55□□□□□ -2.16
NUP54Q7Z3B4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms