Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC104072.1-201ENST00000568817 668 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AL139022.2-201ENST00000606934 443 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AP002782.1-201ENST00000623107 614 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 SNORD45.3-201ENST00000363836 72 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 RNU6-777P-201ENST00000364265 104 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 SNORD14.1-201ENST00000365609 90 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 MIR563-201ENST00000385080 79 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AL031779.1-201ENST00000415663 330 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AL360271.2-201ENST00000447710 161 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 SUMO1P2-201ENST00000452524 304 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AC008628.2-201ENST00000502605 298 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AC116562.3-201ENST00000506136 177 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 RNU6-377P-201ENST00000515965 102 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 RNU6-706P-201ENST00000517229 104 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AC109479.2-201ENST00000517842 174 ntBASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.14□□□□□ -2.59
UBR3Q6ZT12 MIR101-2-201ENST00000362195 79 ntBASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 MIR873-201ENST00000401120 77 ntBASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 MTND1P8-201ENST00000571424 950 ntBASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 AC006600.1-201ENST00000572529 153 ntBASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 MIR548AC-201ENST00000585049 88 ntBASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 AC144521.1-201ENST00000607148 956 ntBASIC-1.15□□□□□ -2.59
UBR3Q6ZT12 RNY3P13-201ENST00000365542 102 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 AC097462.1-201ENST00000514125 324 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 RNU2-56P-201ENST00000516826 190 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 RNU7-156P-201ENST00000517214 74 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 AP002004.2-201ENST00000531656 154 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 MIR5706-201ENST00000579841 80 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 AC120024.3-201ENST00000603167 156 ntBASIC-1.16□□□□□ -2.59
UBR3Q6ZT12 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.16□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.16□□□□□ -2.6
UBR3Q6ZT12 MTCO1P17-201ENST00000411522 491 ntBASIC-1.16□□□□□ -2.6
UBR3Q6ZT12 RNU6-341P-201ENST00000516973 96 ntBASIC-1.16□□□□□ -2.6
UBR3Q6ZT12 RNA5SP454-201ENST00000517231 127 ntBASIC-1.16□□□□□ -2.6
UBR3Q6ZT12 MTND4P9-201ENST00000507819 1346 ntBASIC-1.16□□□□□ -2.6
UBR3Q6ZT12 RNY4P7-201ENST00000364600 96 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 RNU2-62P-201ENST00000410868 191 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 AC008134.1-201ENST00000420943 193 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 AC243428.1-201ENST00000421099 264 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 MTND3P25-201ENST00000509243 135 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 ADI1P3-201ENST00000549509 470 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 AL162376.1-201ENST00000624117 175 ntBASIC-1.17□□□□□ -2.6
UBR3Q6ZT12 RNU5B-1-201ENST00000363286 116 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC117470.1-201ENST00000381974 330 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC012306.1-201ENST00000423267 114 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AL365184.2-201ENST00000431139 435 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 RNU7-73P-201ENST00000458743 63 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 PRDX4P1-201ENST00000507189 574 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC107027.2-201ENST00000512197 115 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 RNY4P37-201ENST00000516225 96 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 MIR548AR-201ENST00000582191 57 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 RPS29P13-201ENST00000402041 169 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 RNU2-54P-201ENST00000410299 190 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC046134.1-201ENST00000514454 666 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 RNU6-150P-201ENST00000516237 95 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 MIR5692A1-201ENST00000580523 69 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC008521.1-201ENST00000587471 187 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 AC245008.1-201ENST00000608123 476 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.18□□□□□ -2.6
UBR3Q6ZT12 RNU6-960P-201ENST00000364056 120 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 AL358934.1-201ENST00000432346 324 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 RNU7-185P-201ENST00000459215 60 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 RNA5SP47-201ENST00000517230 109 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 AC138749.4-201ENST00000563970 127 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 AP002802.2-201ENST00000605877 235 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 AC022960.3-201ENST00000619794 441 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 AC010608.3-201ENST00000625048 527 ntBASIC-1.19□□□□□ -2.6
UBR3Q6ZT12 MIR148A-201ENST00000362215 68 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 ELOCP17-201ENST00000414751 326 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 TIMM9P2-201ENST00000419324 266 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 MTND4LP14-201ENST00000429447 288 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms