Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 Y_RNA.498-201ENST00000384460 102 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 RNU6-823P-201ENST00000391042 103 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 RNU11-3P-201ENST00000391111 133 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 RPL23AP36-201ENST00000413895 458 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.37□□□□□ -2.19
ZNF544Q6NX49 CST2P1-201ENST00000425770 87 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.721-201ENST00000517207 102 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AP005660.1-201ENST00000522972 293 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AL442663.2-201ENST00000554385 511 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 MIR3198-2-201ENST00000577868 80 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AC022432.1-201ENST00000595739 310 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 RPS29P30-201ENST00000600975 111 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AL390123.1-201ENST00000603216 237 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AC104695.3-201ENST00000604052 296 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 AC016925.2-201ENST00000605108 242 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.37□□□□□ -2.19
ZNF544Q6NX49 MIR338-201ENST00000636369 67 ntBASIC1.37□□□□□ -2.19
ZNF544Q6NX49 SNORD114-7-201ENST00000362520 77 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 RNU6-454P-201ENST00000364292 107 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.243-201ENST00000364481 109 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.326-201ENST00000365176 113 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.462-201ENST00000384268 102 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.551-201ENST00000384661 102 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 RNA5SP501-201ENST00000410990 112 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.36□□□□□ -2.19
ZNF544Q6NX49 AC099677.2-201ENST00000436385 175 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 HMGN2P34-201ENST00000437647 269 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 RPEP5-201ENST00000441137 268 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 SUMO1P2-201ENST00000452524 304 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 RNU6-408P-201ENST00000515910 100 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 RNU6-1146P-201ENST00000516282 102 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.713-201ENST00000517013 96 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.715-201ENST00000517082 110 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.36□□□□□ -2.19
ZNF544Q6NX49 U1.36-201ENST00000620684 176 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.36□□□□□ -2.19
ZNF544Q6NX49 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ZNF544Q6NX49 RNU1-96P-201ENST00000364163 162 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.287-201ENST00000364853 94 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.380-201ENST00000365663 111 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 SNORD63-201ENST00000384262 68 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 RNU6-1011P-201ENST00000384668 107 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 MIR515-2-201ENST00000384883 83 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 MIR515-1-201ENST00000384884 83 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 MIR1252-201ENST00000408861 65 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.35□□□□□ -2.19
ZNF544Q6NX49 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.35□□□□□ -2.19
ZNF544Q6NX49 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.35□□□□□ -2.19
ZNF544Q6NX49 HSPE1P24-201ENST00000450782 238 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 SNORD65B-201ENST00000459126 73 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 U8.20-201ENST00000459445 131 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 AC010598.1-201ENST00000510378 103 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 RNU2-12P-201ENST00000517216 168 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 SUB1P4-201ENST00000566062 339 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 AC055872.1-201ENST00000570978 278 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 MIR4680-201ENST00000580906 66 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 AC011476.5-201ENST00000615594 130 ntBASIC1.35□□□□□ -2.19
ZNF544Q6NX49 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ZNF544Q6NX49 RNU6-626P-201ENST00000363354 107 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.276-201ENST00000364732 109 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.424-201ENST00000384063 103 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU6-926P-201ENST00000384075 107 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU6-20P-201ENST00000384106 107 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.570-201ENST00000384750 101 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU2-54P-201ENST00000410299 190 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNA5SP475-201ENST00000410568 110 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU6-130P-201ENST00000411112 103 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AC009310.1-201ENST00000414414 451 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
ZNF544Q6NX49 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AC005002.2-201ENST00000438228 269 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AC073910.1-201ENST00000445047 438 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU6-1053P-201ENST00000515930 101 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU6-1041P-201ENST00000516254 102 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNVU1-2-201ENST00000516326 135 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 RNU6-107P-201ENST00000516643 102 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AP003072.1-201ENST00000531740 145 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 Y_RNA.772-201ENST00000606692 102 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AL021879.1-201ENST00000611756 288 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 PART1_1.1-201ENST00000611761 217 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AC004467.1-201ENST00000615678 330 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.34□□□□□ -2.19
ZNF544Q6NX49 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AC006001.4-201ENST00000622243 395 ntBASIC1.34□□□□□ -2.19
ZNF544Q6NX49 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.2
ZNF544Q6NX49 RNU6-1266P-201ENST00000362794 105 ntBASIC1.33□□□□□ -2.2
ZNF544Q6NX49 Y_RNA.101-201ENST00000363154 102 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms