Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VARS2Q5ST30 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
VARS2Q5ST30 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VARS2Q5ST30 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARS2Q5ST30 RNU4-82P-201ENST00000362443 140 ntBASIC4.28□□□□□ -1.72
VARS2Q5ST30 snoU2-30.1-201ENST00000365012 70 ntBASIC4.28□□□□□ -1.72
VARS2Q5ST30 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
VARS2Q5ST30 AL135938.1-201ENST00000443141 297 ntBASIC4.28□□□□□ -1.72
VARS2Q5ST30 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.28□□□□□ -1.72
VARS2Q5ST30 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.28□□□□□ -1.72
VARS2Q5ST30 AC020891.4-201ENST00000605745 93 ntBASIC4.28□□□□□ -1.72
VARS2Q5ST30 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.28□□□□□ -1.72
VARS2Q5ST30 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VARS2Q5ST30 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VARS2Q5ST30 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VARS2Q5ST30 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.27□□□□□ -1.73
VARS2Q5ST30 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.27□□□□□ -1.73
VARS2Q5ST30 SNORA1B-201ENST00000362535 133 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 U8.5-201ENST00000364528 136 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 Y_RNA.336-201ENST00000365307 109 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 RNU6-540P-201ENST00000384622 101 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 MIR34C-201ENST00000384831 77 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 SNORD30.1-201ENST00000391309 70 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.27□□□□□ -1.73
VARS2Q5ST30 HMGN2P21-201ENST00000447764 270 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 AL049830.1-201ENST00000468034 425 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 RNU7-2P-201ENST00000516096 62 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 RNU6-70P-201ENST00000516438 60 ntBASIC4.27□□□□□ -1.73
VARS2Q5ST30 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VARS2Q5ST30 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
VARS2Q5ST30 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VARS2Q5ST30 RNU6-1084P-201ENST00000362498 107 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 MIR93-201ENST00000385024 80 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 RNU6-1319P-201ENST00000390855 104 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 RNU6-747P-201ENST00000390928 104 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 RNU6-241P-201ENST00000391148 104 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 HMGN2P8-201ENST00000391458 268 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 MIR548G-201ENST00000408442 89 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 RNU6-177P-201ENST00000411257 104 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 AC087499.7-201ENST00000441958 109 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 RNA5SP179-201ENST00000517284 121 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
VARS2Q5ST30 MIR432-201ENST00000606207 94 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 MIR6841-201ENST00000637129 72 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 AC009093.8-201ENST00000641769 292 ntBASIC4.26□□□□□ -1.73
VARS2Q5ST30 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VARS2Q5ST30 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VARS2Q5ST30 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VARS2Q5ST30 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.26□□□□□ -1.73
VARS2Q5ST30 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.25□□□□□ -1.73
VARS2Q5ST30 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VARS2Q5ST30 MAPK10-253ENST00000641010 4072 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 MIR448-201ENST00000362131 111 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 HMGN2P34-201ENST00000437647 269 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VARS2Q5ST30 RPS29P28-201ENST00000446439 141 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 AL109933.2-201ENST00000452651 260 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 RNU7-45P-201ENST00000459460 63 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 Y_RNA.681-201ENST00000516445 113 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 CYP4A43P-201ENST00000568156 121 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 AC091167.4-201ENST00000605079 184 ntBASIC4.25□□□□□ -1.73
VARS2Q5ST30 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC4.25□□□□□ -1.73
VARS2Q5ST30 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VARS2Q5ST30 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VARS2Q5ST30 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VARS2Q5ST30 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VARS2Q5ST30 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VARS2Q5ST30 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.24□□□□□ -1.73
VARS2Q5ST30 SNORA63.2-201ENST00000362603 126 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 SNORD68-201ENST00000363214 84 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 RNA5SP399-201ENST00000364003 117 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 Y_RNA.241-201ENST00000364470 117 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 Y_RNA.532-201ENST00000384590 113 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 RNU6-519P-201ENST00000410590 108 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.24□□□□□ -1.73
VARS2Q5ST30 AL139247.1-201ENST00000422768 325 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 snoU13.28-201ENST00000459235 104 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 RAC1P2-201ENST00000511164 579 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 SNORD45.4-201ENST00000516629 73 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 RPPH1-2P-201ENST00000516688 293 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 AP002004.2-201ENST00000531656 154 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 YPEL5P3-201ENST00000547227 352 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VARS2Q5ST30 MIR3609-201ENST00000582661 80 ntBASIC4.24□□□□□ -1.73
VARS2Q5ST30 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VARS2Q5ST30 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VARS2Q5ST30 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VARS2Q5ST30 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VARS2Q5ST30 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VARS2Q5ST30 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 SNORA22.1-201ENST00000362701 134 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 RNU6-1274P-201ENST00000384557 107 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 snoU13.11-201ENST00000459219 104 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms