Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNU6-498P-201ENST00000459468 107 ntBASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 AC107393.1-201ENST00000512403 346 ntBASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 Y_RNA.700-201ENST00000516806 100 ntBASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 AC022559.1-201ENST00000520905 205 ntBASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 AC098479.1-201ENST00000609225 154 ntBASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC178Q5BJE1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 RNU6-801P-201ENST00000364087 105 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 RNU1-51P-201ENST00000365345 176 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 SNORA25B-201ENST00000365507 128 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 SNORA26.5-201ENST00000391215 123 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 HSPE1P21-201ENST00000438283 308 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 AC009238.1-201ENST00000442165 424 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 AC009237.6-201ENST00000446969 424 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 Y_RNA.637-201ENST00000459424 114 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 HMGB3P3-201ENST00000510526 400 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 SNORA4.4-201ENST00000515921 135 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 AC025647.1-201ENST00000517879 253 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 AC011921.3-201ENST00000605540 361 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 AL365265.1-201ENST00000621045 234 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 MIR6766-201ENST00000622641 72 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 AC064859.1-201ENST00000624741 174 ntBASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CCDC178Q5BJE1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 Y_RNA.172-201ENST00000363765 102 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 Y_RNA.262-201ENST00000364641 102 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 Y_RNA.287-201ENST00000364853 94 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 Y_RNA.293-201ENST00000364908 93 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 MIR873-201ENST00000401120 77 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 RNU2-48P-201ENST00000410694 191 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 AC123900.1-201ENST00000420390 96 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 AC008134.1-201ENST00000420943 193 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 RPS15AP28-201ENST00000435088 386 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 RPS27P22-201ENST00000478056 241 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 AC018868.1-201ENST00000491307 315 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 AC010598.1-201ENST00000510378 103 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 AC008413.1-201ENST00000511864 177 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 AC136628.3-201ENST00000521868 290 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 CBX3P4-201ENST00000538909 354 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 MIR3684-201ENST00000579779 74 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 Z83818.1-201ENST00000603584 150 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CCDC178Q5BJE1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 AL356292.1-201ENST00000283110 373 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 SNORA27.1-201ENST00000362604 124 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 RNU6-1240P-201ENST00000365155 104 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 MIR1253-201ENST00000408273 105 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 AC016909.1-201ENST00000415916 166 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 COX6CP10-201ENST00000416832 224 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 RPL23AP7-203ENST00000449021 469 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 SUMO1P2-201ENST00000452524 304 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 COX6CP14-201ENST00000469580 174 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 RNA5SP20-201ENST00000515976 84 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 RNU6-1337P-201ENST00000516525 95 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 RNU6-63P-201ENST00000516690 95 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 AP005660.1-201ENST00000522972 293 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 AC087441.2-201ENST00000529141 262 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 AC068647.2-201ENST00000637380 353 ntBASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CCDC178Q5BJE1 SNORD115-3-201ENST00000363100 82 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 RNU6-271P-201ENST00000363858 105 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 RNU4-10P-201ENST00000364383 140 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 SNORA72.4-201ENST00000384174 132 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 SNORD116-13-201ENST00000384408 92 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 RNA5SP425-201ENST00000410336 112 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 AC018634.1-201ENST00000437554 401 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 RNU7-26P-201ENST00000458980 63 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 MIR5694-201ENST00000581190 76 ntBASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC178Q5BJE1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.304-201ENST00000365011 112 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 Y_RNA.368-201ENST00000365547 113 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 RNU6-136P-201ENST00000384663 107 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 MIR548I3-201ENST00000408378 149 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 MIR548I1-201ENST00000408810 149 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 OOSP1P1-201ENST00000423265 274 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 HMGN2P34-201ENST00000437647 269 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 MTCO1P44-201ENST00000441935 243 ntBASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC178Q5BJE1 RPS26P55-201ENST00000471178 356 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms