Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC006380.1-201ENST00000603598 186 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 U6.115-201ENST00000636045 103 ntBASIC1.91□□□□□ -2.1
USP41Q3LFD5 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 Y_RNA.230-201ENST00000364348 109 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 RNU6-1175P-201ENST00000365200 107 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 SNORA63.7-201ENST00000365579 123 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 RNA5SP323-201ENST00000391094 133 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 SNORA17.3-201ENST00000391159 129 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL590004.1-201ENST00000405321 300 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL355796.1-201ENST00000406706 323 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.9□□□□□ -2.11
USP41Q3LFD5 RPS27P22-201ENST00000478056 241 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 RNU6-155P-201ENST00000516347 100 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AC023157.2-201ENST00000540596 141 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL442663.2-201ENST00000554385 511 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL137100.2-201ENST00000555786 315 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 MIR3684-201ENST00000579779 74 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.9□□□□□ -2.11
USP41Q3LFD5 AC022432.1-201ENST00000595739 310 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AC069114.2-201ENST00000604699 304 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 RAC1P9-201ENST00000604990 392 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
USP41Q3LFD5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
USP41Q3LFD5 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 RNU6-407P-201ENST00000365280 104 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 Y_RNA.446-201ENST00000384178 104 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 RNU6-937P-201ENST00000384325 106 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 RNU5A-5P-201ENST00000411054 116 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 RNU6-1046P-201ENST00000516538 107 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 RNU7-110P-201ENST00000516891 62 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 RNU2-12P-201ENST00000517216 168 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.89□□□□□ -2.11
USP41Q3LFD5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
USP41Q3LFD5 MIR4255-201ENST00000579351 72 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 AC113195.1-201ENST00000579952 141 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
USP41Q3LFD5 Y_RNA.812-201ENST00000610788 101 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 Y_RNA.784-201ENST00000613803 101 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 Y_RNA.787-201ENST00000616522 101 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 Y_RNA.780-201ENST00000617336 101 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 Y_RNA.801-201ENST00000619005 101 ntBASIC1.89□□□□□ -2.11
USP41Q3LFD5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USP41Q3LFD5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USP41Q3LFD5 RNU6-324P-201ENST00000363957 106 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 RNU6-457P-201ENST00000363999 107 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 Y_RNA.380-201ENST00000365663 111 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 Y_RNA.422-201ENST00000384054 114 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 SNORA8-201ENST00000384574 139 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 RNU2-54P-201ENST00000410299 190 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 RNU6-764P-201ENST00000516396 105 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 RNU1-142P-201ENST00000516682 145 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
USP41Q3LFD5 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 MIR4438-201ENST00000585271 93 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 AC006504.6-201ENST00000590142 199 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.88□□□□□ -2.11
USP41Q3LFD5 Y_RNA.243-201ENST00000364481 109 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 Y_RNA.570-201ENST00000384750 101 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 RNU6-985P-201ENST00000410182 104 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AC113618.1-201ENST00000416747 285 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AC244636.1-201ENST00000421152 228 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 RNU6-966P-201ENST00000516479 104 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 RNU6-897P-201ENST00000517135 105 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AC131281.1-201ENST00000522984 164 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AC084364.2-201ENST00000546924 395 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 SUB1P4-201ENST00000566062 339 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AC022441.3-201ENST00000605737 136 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AC011373.1-201ENST00000607270 237 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AL359075.3-201ENST00000613288 217 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 AC006435.5-201ENST00000624486 112 ntBASIC1.87□□□□□ -2.11
USP41Q3LFD5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
USP41Q3LFD5 AC010615.1-201ENST00000594254 1764 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 SNORA27.1-201ENST00000362604 124 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 SNORD115-30-201ENST00000364117 82 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 Y_RNA.210-201ENST00000364161 110 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 Y_RNA.331-201ENST00000365267 102 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 Y_RNA.462-201ENST00000384268 102 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 RNU6-21P-201ENST00000384710 107 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 SNORA67.5-201ENST00000391036 107 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 RNU4-30P-201ENST00000410245 143 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 RPL23AP36-201ENST00000413895 458 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 MRPS10P1-201ENST00000448483 130 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 SNORA40.15-201ENST00000516884 107 ntBASIC1.86□□□□□ -2.11
USP41Q3LFD5 MIR4498-201ENST00000577599 66 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms