Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RFX4Q33E94 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RFX4Q33E94 SNORA27.1-201ENST00000362604 124 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 Y_RNA.124-201ENST00000363339 93 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 SNORA70.7-201ENST00000384159 133 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 Y_RNA.474-201ENST00000384341 102 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 RNU6-1065P-201ENST00000384513 106 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 RNU6-310P-201ENST00000384655 107 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 RNU6-370P-201ENST00000411008 104 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 MTCO3P19-201ENST00000415864 321 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.99□□□□□ -2.25
RFX4Q33E94 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.99□□□□□ -2.25
RFX4Q33E94 SNX2P2-201ENST00000424553 323 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 STAG3L5P-204ENST00000443759 179 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 RNU6-625P-201ENST00000459412 107 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 AC092991.1-201ENST00000477176 376 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.99□□□□□ -2.25
RFX4Q33E94 AC074133.1-201ENST00000515696 183 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 RNU7-172P-201ENST00000517125 64 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 RNU6-165P-201ENST00000517170 99 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.99□□□□□ -2.25
RFX4Q33E94 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.99□□□□□ -2.25
RFX4Q33E94 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 AC005899.2-201ENST00000584353 90 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 AC091178.2-201ENST00000584401 117 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 AC005828.6-201ENST00000606610 232 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 snoU13.31-201ENST00000607291 104 ntBASIC0.99□□□□□ -2.25
RFX4Q33E94 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RFX4Q33E94 RNU6-1188P-201ENST00000363795 107 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 RNU6-407P-201ENST00000365280 104 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.98□□□□□ -2.25
RFX4Q33E94 Y_RNA.390-201ENST00000383932 102 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 RNU6-505P-201ENST00000384427 107 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 RPL23AP50-201ENST00000434149 455 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 RBMX2P4-201ENST00000441256 376 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 Y_RNA.635-201ENST00000459041 101 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 AC091021.1-201ENST00000468051 388 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.98□□□□□ -2.25
RFX4Q33E94 RNA5SP20-201ENST00000515976 84 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 AC055872.1-201ENST00000570978 278 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 AL513423.1-201ENST00000621695 132 ntBASIC0.98□□□□□ -2.25
RFX4Q33E94 RNU6-117P-201ENST00000365415 107 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 RNU6-890P-201ENST00000384121 107 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 Y_RNA.498-201ENST00000384460 102 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 MIR660-201ENST00000385235 97 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RFX4Q33E94 SNORA75.6-201ENST00000391318 127 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 AL034345.1-201ENST00000407768 123 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 SNORD12B-201ENST00000410433 91 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 CALM2P4-201ENST00000430810 426 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.97□□□□□ -2.25
RFX4Q33E94 DYNLT3P2-201ENST00000442517 295 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 AL137792.2-201ENST00000443484 235 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 UBE2V1P7-201ENST00000446395 340 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 MIR2053-201ENST00000459295 91 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 RNU7-94P-201ENST00000459576 63 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.97□□□□□ -2.25
RFX4Q33E94 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.97□□□□□ -2.25
RFX4Q33E94 MIR4778-201ENST00000577635 80 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 AC073349.3-201ENST00000617616 186 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.97□□□□□ -2.25
RFX4Q33E94 AC106754.2-201ENST00000623006 233 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 MIR3674-201ENST00000636576 68 ntBASIC0.97□□□□□ -2.25
RFX4Q33E94 SNORA1B-201ENST00000362535 133 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 RNU11-5P-201ENST00000391216 129 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 MTCYBP4-201ENST00000401524 249 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.96□□□□□ -2.26
RFX4Q33E94 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.96□□□□□ -2.26
RFX4Q33E94 MRPS18CP6-201ENST00000423587 223 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.96□□□□□ -2.26
RFX4Q33E94 MTCO3P10-201ENST00000455912 772 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 RPL39P38-201ENST00000467018 153 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 OR9P1P-201ENST00000496431 281 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 AC105758.1-201ENST00000506038 399 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 AC022493.2-201ENST00000506122 481 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 RNU6-307P-201ENST00000516743 106 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 SNORA20.3-201ENST00000516880 132 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 AC080078.3-201ENST00000605407 463 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 SNORD3E-202ENST00000627253 216 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 AC068647.2-201ENST00000637380 353 ntBASIC0.96□□□□□ -2.26
RFX4Q33E94 RNA5SP432-201ENST00000362480 116 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RNU6-961P-201ENST00000363893 105 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RNY3P11-201ENST00000364153 102 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 Y_RNA.243-201ENST00000364481 109 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RNU6-1283P-201ENST00000365314 105 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 Y_RNA.577-201ENST00000384794 101 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 U8.16-201ENST00000391279 133 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 MIR873-201ENST00000401120 77 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 Y_RNA.592-201ENST00000410274 109 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RNU6-1156P-201ENST00000410365 100 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RPL23AP36-201ENST00000413895 458 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 AC114482.1-201ENST00000418010 247 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.95□□□□□ -2.26
RFX4Q33E94 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms