Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 RNU6-47P-201ENST00000383866 107 ntBASIC2.64□□□□□ -1.99
SF3B3Q15393 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.64□□□□□ -1.99
SF3B3Q15393 Y_RNA.597-201ENST00000410463 100 ntBASIC2.64□□□□□ -1.99
SF3B3Q15393 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.64□□□□□ -1.99
SF3B3Q15393 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.64□□□□□ -1.99
SF3B3Q15393 AC104332.1-201ENST00000440471 797 ntBASIC2.64□□□□□ -1.99
SF3B3Q15393 AC023141.11-201ENST00000508864 202 ntBASIC2.64□□□□□ -1.99
SF3B3Q15393 RNU6-1098P-201ENST00000516772 96 ntBASIC2.64□□□□□ -1.99
SF3B3Q15393 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.64□□□□□ -1.99
SF3B3Q15393 AL713866.2-201ENST00000603579 219 ntBASIC2.64□□□□□ -1.99
SF3B3Q15393 snoU18.1-201ENST00000629629 71 ntBASIC2.64□□□□□ -1.99
SF3B3Q15393 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SF3B3Q15393 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SF3B3Q15393 Y_RNA.243-201ENST00000364481 109 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 MIR586-201ENST00000385035 97 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 MIR548B-201ENST00000385247 97 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 RNU6-482P-201ENST00000391068 107 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 RNU6-1248P-201ENST00000391096 64 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 HMGN2P23-201ENST00000456759 269 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 AC140059.1-201ENST00000489238 361 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 SNORD14A-201ENST00000606526 91 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.63□□□□□ -1.99
SF3B3Q15393 AC090517.3-201ENST00000625170 141 ntBASIC2.63□□□□□ -1.99
SF3B3Q15393 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SF3B3Q15393 RNU6-1272P-201ENST00000362776 107 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 RNU6-1020P-201ENST00000363684 107 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 RNU6-682P-201ENST00000363843 106 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 RNU6-944P-201ENST00000364023 107 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 Y_RNA.361-201ENST00000365515 120 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 RNU6-211P-201ENST00000384047 107 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 RNU6-1274P-201ENST00000384557 107 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 COX6CP10-201ENST00000416832 224 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 RPL30P4-201ENST00000429309 333 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 MTND2P29-201ENST00000438595 412 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
SF3B3Q15393 RNA5SP82-201ENST00000516707 92 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.62□□□□□ -1.99
SF3B3Q15393 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SF3B3Q15393 AC080100.1-201ENST00000624239 5356 ntBASIC2.62□□□□□ -1.99
SF3B3Q15393 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SF3B3Q15393 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SF3B3Q15393 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.61□□□□□ -1.99
SF3B3Q15393 Y_RNA.304-201ENST00000365011 112 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 Y_RNA.464-201ENST00000384282 110 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 RNU6-918P-201ENST00000391219 106 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 AL031003.1-201ENST00000404229 172 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 AL603825.1-201ENST00000438481 80 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 HMGN2P9-201ENST00000476875 229 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SF3B3Q15393 RNU5F-4P-201ENST00000516581 114 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 AP005660.1-201ENST00000522972 293 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 MIR3199-1-201ENST00000582434 88 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 AC072026.1-201ENST00000605023 201 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 AL008718.3-201ENST00000610217 321 ntBASIC2.61□□□□□ -1.99
SF3B3Q15393 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
SF3B3Q15393 RNU6-545P-201ENST00000362681 104 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 RNU6-324P-201ENST00000363957 106 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 SNORA3A-201ENST00000364113 130 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 RNU6-1305P-201ENST00000364353 104 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 MIR1294-201ENST00000408503 142 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 U6atac.2-201ENST00000408644 118 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 Y_RNA.637-201ENST00000459424 114 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 RPL23AP42-201ENST00000471152 471 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.6□□□□□ -1.99
SF3B3Q15393 MIR449C-201ENST00000516047 92 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 RNY3P16-201ENST00000516338 101 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 AC022559.1-201ENST00000520905 205 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SF3B3Q15393 AC018630.3-201ENST00000542637 96 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 U6.115-201ENST00000636045 103 ntBASIC2.6□□□□□ -1.99
SF3B3Q15393 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SF3B3Q15393 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SF3B3Q15393 RNU6-653P-201ENST00000363074 106 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 SNORA26.9-201ENST00000391322 122 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 MIR548M-201ENST00000408260 86 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 MIR1185-2-201ENST00000408687 86 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 AC024067.1-201ENST00000426199 223 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 AL135790.2-201ENST00000437701 267 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
SF3B3Q15393 RNU6-861P-201ENST00000516745 106 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 RNU6-1212P-201ENST00000517023 104 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 SCARNA3-201ENST00000517097 143 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 AC087441.2-201ENST00000529141 262 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 MIR4308-201ENST00000580634 81 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.59□□□□□ -1.99
SF3B3Q15393 AL365265.1-201ENST00000621045 234 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 AC012640.5-201ENST00000623897 319 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 MIR7157-201ENST00000635801 60 ntBASIC2.59□□□□□ -1.99
SF3B3Q15393 Y_RNA.233-201ENST00000364407 101 ntBASIC2.58□□□□□ -2
SF3B3Q15393 Y_RNA.262-201ENST00000364641 102 ntBASIC2.58□□□□□ -2
SF3B3Q15393 RNU6-923P-201ENST00000364753 107 ntBASIC2.58□□□□□ -2
SF3B3Q15393 Y_RNA.308-201ENST00000365043 101 ntBASIC2.58□□□□□ -2
SF3B3Q15393 RNU6-234P-201ENST00000365229 104 ntBASIC2.58□□□□□ -2
SF3B3Q15393 Y_RNA.435-201ENST00000384095 112 ntBASIC2.58□□□□□ -2
SF3B3Q15393 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
SF3B3Q15393 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.58□□□□□ -2
SF3B3Q15393 MIR1283-1-201ENST00000408494 87 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms