Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-1252P-201ENST00000363054 104 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.157-201ENST00000363638 102 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.265-201ENST00000364677 108 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.405-201ENST00000383979 100 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.451-201ENST00000384200 100 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 RNY1P14-201ENST00000384426 108 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.524-201ENST00000384564 100 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.561-201ENST00000384694 100 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 MIR608-201ENST00000384820 100 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 RNU6-332P-201ENST00000391193 108 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 U8.16-201ENST00000391279 133 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 AL355796.1-201ENST00000406706 323 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 RPL30P16-201ENST00000419341 429 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 EIF1P2-201ENST00000428233 350 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 USP9YP16-201ENST00000430287 407 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 CALM2P4-201ENST00000430810 426 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.5□□□□□ -2.33
FOXF1Q12946 USP9YP23-201ENST00000455085 407 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 SNORD5.1-201ENST00000458800 75 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 RNU6-1278P-201ENST00000516130 107 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 RNU6-197P-201ENST00000516680 100 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.706-201ENST00000516933 99 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.5□□□□□ -2.33
FOXF1Q12946 MIR4273-201ENST00000582824 84 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.5□□□□□ -2.33
FOXF1Q12946 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.116-201ENST00000363292 103 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNU6-117P-201ENST00000365415 107 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 Y_RNA.361-201ENST00000365515 120 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNU6-969P-201ENST00000383900 105 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 Y_RNA.402-201ENST00000383972 102 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNU6-1013P-201ENST00000384180 107 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNU6-1145P-201ENST00000384246 107 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 Y_RNA.533-201ENST00000384596 114 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 MIR520G-201ENST00000385064 90 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AC009161.1-201ENST00000417306 376 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.49□□□□□ -2.33
FOXF1Q12946 Z83846.1-201ENST00000446798 265 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.49□□□□□ -2.33
FOXF1Q12946 snoU13.25-201ENST00000458945 104 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNU7-21P-201ENST00000459430 62 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.49□□□□□ -2.33
FOXF1Q12946 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.49□□□□□ -2.33
FOXF1Q12946 RNA5SP220-201ENST00000516298 104 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNU6-506P-201ENST00000516553 94 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 RNU6-1314P-201ENST00000517139 104 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AC090142.3-201ENST00000519012 385 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AC093023.1-201ENST00000547375 507 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 MIR4778-201ENST00000577635 80 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.49□□□□□ -2.33
FOXF1Q12946 AC125232.2-201ENST00000592457 143 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AC068790.6-201ENST00000602558 258 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AC027279.3-201ENST00000625055 122 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 AC024614.3-201ENST00000637860 256 ntBASIC0.49□□□□□ -2.33
FOXF1Q12946 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
FOXF1Q12946 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
FOXF1Q12946 CASC19-280ENST00000642102 1351 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 SNORA1B-201ENST00000362535 133 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 RNU6-833P-201ENST00000363486 107 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 RNY4P14-201ENST00000363656 96 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 Y_RNA.194-201ENST00000363985 102 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 Y_RNA.559-201ENST00000384686 107 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 MIR329-1-201ENST00000385028 80 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 MIR873-201ENST00000401120 77 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.48□□□□□ -2.33
FOXF1Q12946 ELOCP21-201ENST00000412558 336 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 AC018865.2-201ENST00000423631 129 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 AL137792.2-201ENST00000443484 235 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 UBE2V1P7-201ENST00000446395 340 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 AC245047.8-201ENST00000456455 284 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 RNU7-90P-201ENST00000459216 62 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 AC091021.1-201ENST00000468051 388 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.48□□□□□ -2.33
FOXF1Q12946 RNA5SP20-201ENST00000515976 84 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 RNU1-54P-201ENST00000517181 120 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.48□□□□□ -2.33
FOXF1Q12946 MIR3942-201ENST00000585264 109 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 AL391903.3-201ENST00000612158 163 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 RMST_2.1-201ENST00000617263 136 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 MIR6734-201ENST00000621166 68 ntBASIC0.48□□□□□ -2.33
FOXF1Q12946 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.47□□□□□ -2.33
FOXF1Q12946 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
FOXF1Q12946 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
FOXF1Q12946 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
FOXF1Q12946 RNU1-133P-201ENST00000364867 167 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 Y_RNA.364-201ENST00000365532 101 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 MIR190B-201ENST00000401119 79 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.47□□□□□ -2.33
FOXF1Q12946 RPS3AP1-201ENST00000413190 320 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 AC093850.1-201ENST00000454121 251 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 LINC01399-202ENST00000458450 244 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.47□□□□□ -2.33
FOXF1Q12946 AC018710.1-201ENST00000506509 158 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 RNU6-947P-201ENST00000516264 106 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 AC022868.1-201ENST00000517767 391 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 AC105029.1-201ENST00000520250 669 ntBASIC0.47□□□□□ -2.33
FOXF1Q12946 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms