Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU6-440P-201ENST00000390882 105 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 MRPL42P3-201ENST00000401492 326 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 AL355796.1-201ENST00000406706 323 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 RN7SKP200-201ENST00000410564 320 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.38□□□□□ -2.19
GABPAQ06546 MTND4P28-201ENST00000426217 387 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 AC245047.3-201ENST00000429428 127 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.38□□□□□ -2.19
GABPAQ06546 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 SNORA31.10-201ENST00000516482 106 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 AC144568.1-201ENST00000520139 137 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.38□□□□□ -2.19
GABPAQ06546 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.38□□□□□ -2.19
GABPAQ06546 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 AC133104.2-201ENST00000615272 193 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 MIR8054-201ENST00000620877 86 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 AC006435.5-201ENST00000624486 112 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 MIR1302-1-201ENST00000637932 143 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.38□□□□□ -2.19
GABPAQ06546 RNY3P11-201ENST00000364153 102 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 Y_RNA.259-201ENST00000364619 101 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 RNU6-407P-201ENST00000365280 104 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 RNU6-926P-201ENST00000384075 107 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 MIR194-1-201ENST00000384892 85 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 Y_RNA.592-201ENST00000410274 109 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 AL161935.2-201ENST00000414627 60 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 RPS26P55-201ENST00000471178 356 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 AC091951.2-201ENST00000500762 203 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.37□□□□□ -2.19
GABPAQ06546 RNU6-408P-201ENST00000515910 100 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 RNU7-4P-201ENST00000516961 62 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 AC019176.1-201ENST00000518519 225 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 AC090821.2-201ENST00000523552 176 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.37□□□□□ -2.19
GABPAQ06546 AL442163.3-201ENST00000554110 156 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.37□□□□□ -2.19
GABPAQ06546 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
GABPAQ06546 MIR3674-201ENST00000636576 68 ntBASIC1.37□□□□□ -2.19
GABPAQ06546 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
GABPAQ06546 Y_RNA.314-201ENST00000365114 102 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 MRPL35P1-201ENST00000404272 572 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 RAB28P5-201ENST00000427490 651 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 COX6CP14-201ENST00000469580 174 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.36□□□□□ -2.19
GABPAQ06546 RNA5SP20-201ENST00000515976 84 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 RNU6-277P-201ENST00000516272 106 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 RNU7-172P-201ENST00000517125 64 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.36□□□□□ -2.19
GABPAQ06546 MIR3684-201ENST00000579779 74 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 MIR3937-201ENST00000580135 106 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 AC084781.2-201ENST00000615568 161 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 MIR6767-201ENST00000637302 66 ntBASIC1.36□□□□□ -2.19
GABPAQ06546 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 RNU1-93P-201ENST00000364704 169 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 Y_RNA.303-201ENST00000364998 94 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 RNA5SP259-201ENST00000365541 109 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 RNU6-1310P-201ENST00000384153 107 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 RNU6-1031P-201ENST00000384773 107 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 MTCO3P19-201ENST00000415864 321 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 MRPS18CP6-201ENST00000423587 223 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.35□□□□□ -2.19
GABPAQ06546 AC093019.1-201ENST00000443135 252 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.35□□□□□ -2.19
GABPAQ06546 RNU7-94P-201ENST00000459576 63 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.35□□□□□ -2.19
GABPAQ06546 SUMO2P16-201ENST00000519475 264 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 AP002001.1-203ENST00000534002 267 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 RPL21P9-201ENST00000556149 474 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.35□□□□□ -2.19
GABPAQ06546 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.35□□□□□ -2.19
GABPAQ06546 AL021879.1-201ENST00000611756 288 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 AC021506.2-201ENST00000612354 169 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 U6.115-201ENST00000636045 103 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
GABPAQ06546 AC018630.2-201ENST00000534866 2403 ntBASIC1.35□□□□□ -2.19
GABPAQ06546 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
GABPAQ06546 SNORD33-201ENST00000362761 85 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 RNU6-454P-201ENST00000364292 107 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 MIR513A1-201ENST00000385138 129 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.34□□□□□ -2.19
GABPAQ06546 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.34□□□□□ -2.19
GABPAQ06546 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
GABPAQ06546 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 AC097462.1-201ENST00000514125 324 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 RNA5SP445-201ENST00000515889 115 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 AC136443.5-201ENST00000603741 370 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 AL132765.2-201ENST00000610812 351 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 MIR6079-201ENST00000635807 62 ntBASIC1.34□□□□□ -2.19
GABPAQ06546 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
GABPAQ06546 SNORA27.1-201ENST00000362604 124 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 RNU6-490P-201ENST00000362985 107 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 Y_RNA.356-201ENST00000365475 113 ntBASIC1.33□□□□□ -2.2
GABPAQ06546 RNU6-1080P-201ENST00000383982 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms