Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL590632.1-201ENST00000424289 371 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.09□□□□□ -2.42
CCL20P78556 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.09□□□□□ -2.42
CCL20P78556 RNU7-187P-201ENST00000458985 68 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 AC093534.1-201ENST00000504977 132 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 AC060788.1-201ENST00000521318 469 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 MTND2P38-201ENST00000522536 667 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.09□□□□□ -2.42
CCL20P78556 AL591926.4-201ENST00000616895 298 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 AC073534.2-201ENST00000620377 381 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 AC078938.1-201ENST00000620993 318 ntBASIC-0.09□□□□□ -2.42
CCL20P78556 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
CCL20P78556 SNORA42.1-201ENST00000363515 137 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 RNU1-133P-201ENST00000364867 167 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 MIR1276-201ENST00000408707 83 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 MTND2P18-201ENST00000419962 1030 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.1□□□□□ -2.43
CCL20P78556 MTCO2P30-201ENST00000503662 364 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 AC046134.1-201ENST00000514454 666 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 RNA5SP401-201ENST00000515920 127 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 AC134698.4-201ENST00000523451 826 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 AC026371.1-201ENST00000551867 419 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.1□□□□□ -2.43
CCL20P78556 MIR4762-201ENST00000585261 75 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 AC007494.3-201ENST00000624660 743 ntBASIC-0.1□□□□□ -2.43
CCL20P78556 SNORD114-16-201ENST00000363044 70 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 RNA5SP214-201ENST00000363378 118 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 SNORD114-9-201ENST00000364370 72 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 RNU6-38P-201ENST00000384085 107 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 MT-TH-201ENST00000387441 69 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CCL20P78556 MIR873-201ENST00000401120 77 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 AC073464.1-201ENST00000429823 534 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 MTND1P26-201ENST00000440488 538 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 MTND1P27-201ENST00000451117 902 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 snoU13.21-201ENST00000459368 105 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.11□□□□□ -2.43
CCL20P78556 RNU6-63P-201ENST00000516690 95 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 SNORA4-201ENST00000584302 138 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 AF250324.2-201ENST00000608299 610 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 AC092807.2-201ENST00000609367 243 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 FAM157A-202ENST00000615155 405 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 AC091925.1-201ENST00000623204 462 ntBASIC-0.11□□□□□ -2.43
CCL20P78556 MIR337-201ENST00000362281 93 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 RNA5SP511-201ENST00000410487 115 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 AL139396.1-201ENST00000421137 167 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 AL353997.1-201ENST00000432936 108 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.12□□□□□ -2.43
CCL20P78556 RNU6-405P-201ENST00000516637 110 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 RNA5SP94-201ENST00000516917 108 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 AC009094.1-201ENST00000564443 426 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 MIR3915-201ENST00000578518 97 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 POLR3GP2-201ENST00000588366 668 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.12□□□□□ -2.43
CCL20P78556 uc_338.16-201ENST00000621804 95 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.12□□□□□ -2.43
CCL20P78556 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.12□□□□□ -2.43
CCL20P78556 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.12□□□□□ -2.43
CCL20P78556 SNORD118-201ENST00000363593 134 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 RNU6-934P-201ENST00000365154 107 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 RNU6-396P-201ENST00000365369 105 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.13□□□□□ -2.43
CCL20P78556 MTCO1P20-201ENST00000425366 358 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 AC015818.7-201ENST00000428754 109 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 AL606489.2-201ENST00000433886 234 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 AC087499.7-201ENST00000441958 109 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.13□□□□□ -2.43
CCL20P78556 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 MTND3P3-201ENST00000505004 126 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 RNU6-863P-201ENST00000515989 104 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 RNU4-77P-201ENST00000516692 156 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 MTCO2P4-201ENST00000517968 247 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 AC112693.2-201ENST00000556538 232 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.13□□□□□ -2.43
CCL20P78556 MIR4771-2-201ENST00000577758 74 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 MIR4771-1-201ENST00000582617 74 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 MIR4768-201ENST00000585270 74 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 U6.115-201ENST00000636045 103 ntBASIC-0.13□□□□□ -2.43
CCL20P78556 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
CCL20P78556 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.14□□□□□ -2.43
CCL20P78556 RNU4-20P-201ENST00000365601 151 ntBASIC-0.14□□□□□ -2.43
CCL20P78556 SNORA26.8-201ENST00000391306 124 ntBASIC-0.14□□□□□ -2.43
CCL20P78556 AL354751.2-201ENST00000415471 210 ntBASIC-0.14□□□□□ -2.43
CCL20P78556 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.14□□□□□ -2.43
CCL20P78556 SNORD45.4-201ENST00000516629 73 ntBASIC-0.14□□□□□ -2.43
CCL20P78556 AP003327.1-201ENST00000529684 127 ntBASIC-0.14□□□□□ -2.43
CCL20P78556 AL355375.2-201ENST00000574825 175 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms