Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC097462.1-201ENST00000514125 324 ntBASIC2.17□□□□□ -2.06
RAE1P78406 RNU6-1337P-201ENST00000516525 95 ntBASIC2.17□□□□□ -2.06
RAE1P78406 AC136628.3-201ENST00000521868 290 ntBASIC2.17□□□□□ -2.06
RAE1P78406 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.17□□□□□ -2.06
RAE1P78406 SNORD14A-201ENST00000606526 91 ntBASIC2.17□□□□□ -2.06
RAE1P78406 MIR338-201ENST00000636369 67 ntBASIC2.17□□□□□ -2.06
RAE1P78406 FO624990.1-201ENST00000636373 85 ntBASIC2.17□□□□□ -2.06
RAE1P78406 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAE1P78406 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAE1P78406 Y_RNA.117-201ENST00000363294 101 ntBASIC2.16□□□□□ -2.06
RAE1P78406 RNU1-22P-201ENST00000363334 158 ntBASIC2.16□□□□□ -2.06
RAE1P78406 Y_RNA.341-201ENST00000365341 102 ntBASIC2.16□□□□□ -2.06
RAE1P78406 RNU6-117P-201ENST00000365415 107 ntBASIC2.16□□□□□ -2.06
RAE1P78406 Y_RNA.515-201ENST00000384535 112 ntBASIC2.16□□□□□ -2.06
RAE1P78406 MIR524-201ENST00000385242 87 ntBASIC2.16□□□□□ -2.06
RAE1P78406 AL117342.1-201ENST00000404861 406 ntBASIC2.16□□□□□ -2.06
RAE1P78406 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.16□□□□□ -2.06
RAE1P78406 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.16□□□□□ -2.06
RAE1P78406 AC010409.1-201ENST00000487382 476 ntBASIC2.16□□□□□ -2.06
RAE1P78406 RPL36AP21-201ENST00000490372 323 ntBASIC2.16□□□□□ -2.06
RAE1P78406 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.16□□□□□ -2.06
RAE1P78406 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.16□□□□□ -2.06
RAE1P78406 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.16□□□□□ -2.06
RAE1P78406 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.16□□□□□ -2.06
RAE1P78406 AC009779.6-201ENST00000603972 165 ntBASIC2.16□□□□□ -2.06
RAE1P78406 U6.73-201ENST00000619194 103 ntBASIC2.16□□□□□ -2.06
RAE1P78406 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.16□□□□□ -2.06
RAE1P78406 AL136360.1-201ENST00000503377 1900 ntBASIC2.16□□□□□ -2.06
RAE1P78406 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.16□□□□□ -2.06
RAE1P78406 ZNF720P1-201ENST00000562403 1939 ntBASIC2.15□□□□□ -2.06
RAE1P78406 AL356292.1-201ENST00000283110 373 ntBASIC2.15□□□□□ -2.07
RAE1P78406 Y_RNA.65-201ENST00000362846 100 ntBASIC2.15□□□□□ -2.07
RAE1P78406 Y_RNA.76-201ENST00000362931 109 ntBASIC2.15□□□□□ -2.07
RAE1P78406 Y_RNA.122-201ENST00000363331 96 ntBASIC2.15□□□□□ -2.07
RAE1P78406 Y_RNA.269-201ENST00000364685 89 ntBASIC2.15□□□□□ -2.07
RAE1P78406 SNORA72.4-201ENST00000384174 132 ntBASIC2.15□□□□□ -2.07
RAE1P78406 HMGN2P39-201ENST00000398005 273 ntBASIC2.15□□□□□ -2.07
RAE1P78406 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.15□□□□□ -2.07
RAE1P78406 RPS20P10-201ENST00000451209 253 ntBASIC2.15□□□□□ -2.07
RAE1P78406 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.15□□□□□ -2.07
RAE1P78406 YWHAEP4-201ENST00000505390 198 ntBASIC2.15□□□□□ -2.07
RAE1P78406 RNU6-1278P-201ENST00000516130 107 ntBASIC2.15□□□□□ -2.07
RAE1P78406 Y_RNA.679-201ENST00000516416 91 ntBASIC2.15□□□□□ -2.07
RAE1P78406 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.15□□□□□ -2.07
RAE1P78406 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
RAE1P78406 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RAE1P78406 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RAE1P78406 RNU6-801P-201ENST00000364087 105 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNU1-96P-201ENST00000364163 162 ntBASIC2.14□□□□□ -2.07
RAE1P78406 SNORD116-13-201ENST00000384408 92 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNU6-417P-201ENST00000384712 107 ntBASIC2.14□□□□□ -2.07
RAE1P78406 MIR515-2-201ENST00000384883 83 ntBASIC2.14□□□□□ -2.07
RAE1P78406 MIR515-1-201ENST00000384884 83 ntBASIC2.14□□□□□ -2.07
RAE1P78406 MIR518A2-201ENST00000384966 87 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNU6-763P-201ENST00000390865 106 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNA5SP465-201ENST00000391195 109 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNU6-651P-201ENST00000411040 105 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNU2-14P-201ENST00000411053 191 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNA5SP270-201ENST00000411361 118 ntBASIC2.14□□□□□ -2.07
RAE1P78406 BX510359.4-201ENST00000423750 193 ntBASIC2.14□□□□□ -2.07
RAE1P78406 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
RAE1P78406 BTF3P11-201ENST00000426582 477 ntBASIC2.14□□□□□ -2.07
RAE1P78406 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RNA5SP24-201ENST00000516478 95 ntBASIC2.14□□□□□ -2.07
RAE1P78406 AC005786.1-201ENST00000588553 154 ntBASIC2.14□□□□□ -2.07
RAE1P78406 AC007229.1-201ENST00000590455 412 ntBASIC2.14□□□□□ -2.07
RAE1P78406 AC004832.4-201ENST00000608952 331 ntBASIC2.14□□□□□ -2.07
RAE1P78406 AL442067.1-201ENST00000613261 223 ntBASIC2.14□□□□□ -2.07
RAE1P78406 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
RAE1P78406 AC073349.3-201ENST00000617616 186 ntBASIC2.14□□□□□ -2.07
RAE1P78406 SCARNA15.3-201ENST00000626315 122 ntBASIC2.14□□□□□ -2.07
RAE1P78406 SCARNA4.1-201ENST00000628597 123 ntBASIC2.14□□□□□ -2.07
RAE1P78406 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RAE1P78406 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RAE1P78406 AC005336.3-201ENST00000623833 2679 ntBASIC2.13□□□□□ -2.07
RAE1P78406 Y_RNA.172-201ENST00000363765 102 ntBASIC2.13□□□□□ -2.07
RAE1P78406 SNORA26.5-201ENST00000391215 123 ntBASIC2.13□□□□□ -2.07
RAE1P78406 MIR1283-2-201ENST00000408621 87 ntBASIC2.13□□□□□ -2.07
RAE1P78406 AL139156.1-201ENST00000412785 841 ntBASIC2.13□□□□□ -2.07
RAE1P78406 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.13□□□□□ -2.07
RAE1P78406 OOSP1P1-201ENST00000423265 274 ntBASIC2.13□□□□□ -2.07
RAE1P78406 AC011753.1-201ENST00000451001 220 ntBASIC2.13□□□□□ -2.07
RAE1P78406 Y_RNA.637-201ENST00000459424 114 ntBASIC2.13□□□□□ -2.07
RAE1P78406 COX6CP14-201ENST00000469580 174 ntBASIC2.13□□□□□ -2.07
RAE1P78406 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
RAE1P78406 RNU7-172P-201ENST00000517125 64 ntBASIC2.13□□□□□ -2.07
RAE1P78406 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.13□□□□□ -2.07
RAE1P78406 MIR3668-201ENST00000582138 75 ntBASIC2.13□□□□□ -2.07
RAE1P78406 AL008718.3-201ENST00000610217 321 ntBASIC2.13□□□□□ -2.07
RAE1P78406 AL359075.3-201ENST00000613288 217 ntBASIC2.13□□□□□ -2.07
RAE1P78406 AC022513.1-201ENST00000624512 117 ntBASIC2.13□□□□□ -2.07
RAE1P78406 snoU18.1-201ENST00000629629 71 ntBASIC2.13□□□□□ -2.07
RAE1P78406 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
RAE1P78406 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
RAE1P78406 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RAE1P78406 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RAE1P78406 SNORA3A-201ENST00000364113 130 ntBASIC2.12□□□□□ -2.07
RAE1P78406 RNU6-211P-201ENST00000384047 107 ntBASIC2.12□□□□□ -2.07
RAE1P78406 Y_RNA.510-201ENST00000384511 114 ntBASIC2.12□□□□□ -2.07
RAE1P78406 AL355497.1-201ENST00000406262 551 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms