Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-480P-201ENST00000384332 107 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 SNORA8.3-201ENST00000384679 139 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 AC133104.1-201ENST00000429100 218 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 AC008608.1-201ENST00000603910 127 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 AC096720.1-201ENST00000604441 183 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 AC246785.4-201ENST00000605374 287 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.73□□□□□ -2.53
RPS28P62857 AL607023.1-201ENST00000620045 248 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 AL359757.2-201ENST00000624309 274 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 AC068137.4-201ENST00000638485 296 ntBASIC-0.73□□□□□ -2.53
RPS28P62857 RNA5SP432-201ENST00000362480 116 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-169P-201ENST00000365336 107 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 AL049545.1-201ENST00000401856 572 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-447P-201ENST00000410293 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-355P-201ENST00000410427 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-791P-201ENST00000410467 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNA5SP451-201ENST00000410588 110 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-705P-201ENST00000410601 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-860P-201ENST00000410860 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-785P-201ENST00000411324 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.74□□□□□ -2.53
RPS28P62857 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.74□□□□□ -2.53
RPS28P62857 MTND4P19-201ENST00000446659 478 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 SCARNA18-201ENST00000459004 134 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNA5SP20-201ENST00000515976 84 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-237P-201ENST00000515985 71 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU6-180P-201ENST00000516697 61 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNA5SP330-201ENST00000517096 96 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.74□□□□□ -2.53
RPS28P62857 MIR4775-201ENST00000581168 75 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 AC091304.9-201ENST00000612091 226 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 U6.90-201ENST00000614007 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 U6.70-201ENST00000620287 104 ntBASIC-0.74□□□□□ -2.53
RPS28P62857 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 SNORA72.1-201ENST00000363485 129 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.75□□□□□ -2.53
RPS28P62857 USP9YP25-201ENST00000457708 443 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 RNU7-102P-201ENST00000458948 62 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.75□□□□□ -2.53
RPS28P62857 AC018710.1-201ENST00000506509 158 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 SNORA14.1-201ENST00000516113 141 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 AC026371.1-201ENST00000551867 419 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 MTCO3P23-201ENST00000561363 289 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 AP001180.6-201ENST00000584918 159 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 AF250324.2-201ENST00000608299 610 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 MIR7107-201ENST00000611489 80 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 uc_338.28-201ENST00000612082 187 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 AL133173.2-201ENST00000614270 90 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 AC010608.3-201ENST00000625048 527 ntBASIC-0.75□□□□□ -2.53
RPS28P62857 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RNY1-201ENST00000364228 113 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 U8.5-201ENST00000364528 136 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 SNORD49B-201ENST00000365172 72 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 SNORA20B-201ENST00000384220 132 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RNU6-735P-201ENST00000410612 107 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RN7SKP142-201ENST00000411236 328 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RNU7-138P-201ENST00000459479 64 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RPL39P34-201ENST00000477141 156 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.76□□□□□ -2.53
RPS28P62857 AC105417.1-201ENST00000514691 285 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RNU6-848P-201ENST00000515948 107 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RNU6-617P-201ENST00000516147 107 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RNU6-473P-201ENST00000516164 107 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 AC090572.1-201ENST00000519251 160 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 MTND1P8-201ENST00000571424 950 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 MIR4264-201ENST00000583520 66 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 uc_338.11-201ENST00000619132 160 ntBASIC-0.76□□□□□ -2.53
RPS28P62857 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 AL022718.1-201ENST00000412004 84 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.77□□□□□ -2.53
RPS28P62857 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.77□□□□□ -2.53
RPS28P62857 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.77□□□□□ -2.53
RPS28P62857 AL353572.1-201ENST00000442490 417 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 MTND1P17-201ENST00000448961 204 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 RNU7-167P-201ENST00000459160 62 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.77□□□□□ -2.53
RPS28P62857 AC007751.1-201ENST00000529260 376 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 MIR4703-201ENST00000577728 79 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 AC100830.2-201ENST00000581636 240 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 U2.17-201ENST00000611454 95 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 MIR2909-201ENST00000617113 69 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 AC009878.1-201ENST00000621819 340 ntBASIC-0.77□□□□□ -2.53
RPS28P62857 MTND4P12-201ENST00000498999 1377 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 MIR101-1-201ENST00000362265 75 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 RNU4-68P-201ENST00000364314 141 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.78□□□□□ -2.53
RPS28P62857 MTCO2P21-201ENST00000419780 677 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 AC104850.1-201ENST00000435940 476 ntBASIC-0.78□□□□□ -2.53
RPS28P62857 MTND4LP16-201ENST00000440828 295 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms