Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.61□□□□□ -2.15
PAX9P55771 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
PAX9P55771 RNU1-22P-201ENST00000363334 158 ntBASIC1.6□□□□□ -2.15
PAX9P55771 Y_RNA.152-201ENST00000363578 100 ntBASIC1.6□□□□□ -2.15
PAX9P55771 Y_RNA.329-201ENST00000365209 107 ntBASIC1.6□□□□□ -2.15
PAX9P55771 RNU6-407P-201ENST00000365280 104 ntBASIC1.6□□□□□ -2.15
PAX9P55771 Y_RNA.541-201ENST00000384640 113 ntBASIC1.6□□□□□ -2.15
PAX9P55771 RNU6-1105P-201ENST00000384774 107 ntBASIC1.6□□□□□ -2.15
PAX9P55771 Y_RNA.581-201ENST00000391017 97 ntBASIC1.6□□□□□ -2.15
PAX9P55771 RNA5SP100-201ENST00000410903 110 ntBASIC1.6□□□□□ -2.15
PAX9P55771 RNA5SP59-201ENST00000410922 110 ntBASIC1.6□□□□□ -2.15
PAX9P55771 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.6□□□□□ -2.15
PAX9P55771 RPL23AP36-201ENST00000413895 458 ntBASIC1.6□□□□□ -2.15
PAX9P55771 AL390729.2-201ENST00000416137 156 ntBASIC1.6□□□□□ -2.15
PAX9P55771 SNORA59A-201ENST00000459326 152 ntBASIC1.6□□□□□ -2.15
PAX9P55771 RPS26P55-201ENST00000471178 356 ntBASIC1.6□□□□□ -2.15
PAX9P55771 RNA5SP20-201ENST00000515976 84 ntBASIC1.6□□□□□ -2.15
PAX9P55771 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.6□□□□□ -2.15
PAX9P55771 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.6□□□□□ -2.15
PAX9P55771 AP003733.2-201ENST00000529409 171 ntBASIC1.6□□□□□ -2.15
PAX9P55771 MIR3145-201ENST00000580727 82 ntBASIC1.6□□□□□ -2.15
PAX9P55771 SNORD113-5-201ENST00000607261 78 ntBASIC1.6□□□□□ -2.15
PAX9P55771 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.6□□□□□ -2.15
PAX9P55771 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.6□□□□□ -2.15
PAX9P55771 AC127459.3-201ENST00000624328 466 ntBASIC1.6□□□□□ -2.15
PAX9P55771 RNU6-1309P-201ENST00000363305 108 ntBASIC1.59□□□□□ -2.15
PAX9P55771 RNU6-238P-201ENST00000363313 106 ntBASIC1.59□□□□□ -2.15
PAX9P55771 Y_RNA.133-201ENST00000363428 110 ntBASIC1.59□□□□□ -2.15
PAX9P55771 Y_RNA.172-201ENST00000363765 102 ntBASIC1.59□□□□□ -2.15
PAX9P55771 RNU6-505P-201ENST00000384427 107 ntBASIC1.59□□□□□ -2.15
PAX9P55771 SNORA8-201ENST00000384574 139 ntBASIC1.59□□□□□ -2.15
PAX9P55771 RNU6-21P-201ENST00000384710 107 ntBASIC1.59□□□□□ -2.15
PAX9P55771 Y_RNA.574-201ENST00000384766 95 ntBASIC1.59□□□□□ -2.15
PAX9P55771 RNU6-1186P-201ENST00000410429 97 ntBASIC1.59□□□□□ -2.15
PAX9P55771 RNU2-61P-201ENST00000411069 191 ntBASIC1.59□□□□□ -2.15
PAX9P55771 EBAG9P1-201ENST00000418955 543 ntBASIC1.59□□□□□ -2.15
PAX9P55771 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.59□□□□□ -2.15
PAX9P55771 SUMO1P2-201ENST00000452524 304 ntBASIC1.59□□□□□ -2.15
PAX9P55771 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
PAX9P55771 SEPT14P8-201ENST00000508026 178 ntBASIC1.59□□□□□ -2.15
PAX9P55771 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.59□□□□□ -2.15
PAX9P55771 AC097462.1-201ENST00000514125 324 ntBASIC1.59□□□□□ -2.15
PAX9P55771 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.59□□□□□ -2.15
PAX9P55771 AC084364.2-201ENST00000546924 395 ntBASIC1.59□□□□□ -2.15
PAX9P55771 AC008269.2-201ENST00000561915 1105 ntBASIC1.59□□□□□ -2.15
PAX9P55771 DEFB117-201ENST00000602356 141 ntBASIC1.59□□□□□ -2.15
PAX9P55771 AC069114.2-201ENST00000604699 304 ntBASIC1.59□□□□□ -2.15
PAX9P55771 PRR13P7-201ENST00000605538 430 ntBASIC1.59□□□□□ -2.15
PAX9P55771 AC010615.1-201ENST00000594254 1764 ntBASIC1.59□□□□□ -2.16
PAX9P55771 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.58□□□□□ -2.16
PAX9P55771 SNORD114-7-201ENST00000362520 77 ntBASIC1.58□□□□□ -2.16
PAX9P55771 RNU6-112P-201ENST00000363599 104 ntBASIC1.58□□□□□ -2.16
PAX9P55771 RNU6-324P-201ENST00000363957 106 ntBASIC1.58□□□□□ -2.16
PAX9P55771 RNU6-117P-201ENST00000365415 107 ntBASIC1.58□□□□□ -2.16
PAX9P55771 Y_RNA.383-201ENST00000383855 97 ntBASIC1.58□□□□□ -2.16
PAX9P55771 Y_RNA.418-201ENST00000384029 102 ntBASIC1.58□□□□□ -2.16
PAX9P55771 RNU6-296P-201ENST00000384608 107 ntBASIC1.58□□□□□ -2.16
PAX9P55771 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PAX9P55771 SNORA11.4-201ENST00000408823 129 ntBASIC1.58□□□□□ -2.16
PAX9P55771 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.58□□□□□ -2.16
PAX9P55771 RPL31P63-201ENST00000422565 375 ntBASIC1.58□□□□□ -2.16
PAX9P55771 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.58□□□□□ -2.16
PAX9P55771 AL135790.2-201ENST00000437701 267 ntBASIC1.58□□□□□ -2.16
PAX9P55771 AL606517.2-201ENST00000442855 241 ntBASIC1.58□□□□□ -2.16
PAX9P55771 RPL23AP42-201ENST00000471152 471 ntBASIC1.58□□□□□ -2.16
PAX9P55771 RPS26P45-201ENST00000471748 340 ntBASIC1.58□□□□□ -2.16
PAX9P55771 TRBV12-1-201ENST00000479785 344 ntBASIC1.58□□□□□ -2.16
PAX9P55771 AL163195.1-201ENST00000496941 348 ntBASIC1.58□□□□□ -2.16
PAX9P55771 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.58□□□□□ -2.16
PAX9P55771 MIR4299-201ENST00000577899 72 ntBASIC1.58□□□□□ -2.16
PAX9P55771 SNRPGP19-201ENST00000603826 189 ntBASIC1.58□□□□□ -2.16
PAX9P55771 AL359075.3-201ENST00000613288 217 ntBASIC1.58□□□□□ -2.16
PAX9P55771 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
PAX9P55771 AP006437.1-201ENST00000641440 3685 ntBASIC1.58□□□□□ -2.16
PAX9P55771 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PAX9P55771 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PAX9P55771 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.58□□□□□ -2.16
PAX9P55771 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.57□□□□□ -2.16
PAX9P55771 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
PAX9P55771 AC092881.1-201ENST00000638218 2733 ntBASIC1.57□□□□□ -2.16
PAX9P55771 AL356292.1-201ENST00000283110 373 ntBASIC1.57□□□□□ -2.16
PAX9P55771 Y_RNA.16-201ENST00000362421 102 ntBASIC1.57□□□□□ -2.16
PAX9P55771 Y_RNA.84-201ENST00000363011 104 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RNU6-271P-201ENST00000363858 105 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RNU6-1019P-201ENST00000364424 107 ntBASIC1.57□□□□□ -2.16
PAX9P55771 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.57□□□□□ -2.16
PAX9P55771 MIR568-201ENST00000385036 95 ntBASIC1.57□□□□□ -2.16
PAX9P55771 AL158823.1-201ENST00000418441 478 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RPS27P1-201ENST00000450552 247 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RNU6-1143P-201ENST00000516125 104 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RNU7-99P-201ENST00000516271 62 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RNU6-1337P-201ENST00000516525 95 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RNU6-63P-201ENST00000516690 95 ntBASIC1.57□□□□□ -2.16
PAX9P55771 RNA5SP437-201ENST00000517249 129 ntBASIC1.57□□□□□ -2.16
PAX9P55771 MIR1273D-201ENST00000577266 86 ntBASIC1.57□□□□□ -2.16
PAX9P55771 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.57□□□□□ -2.16
PAX9P55771 Y_RNA.783-201ENST00000613546 102 ntBASIC1.57□□□□□ -2.16
PAX9P55771 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.57□□□□□ -2.16
PAX9P55771 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms