Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-1278P-201ENST00000516130 107 ntBASIC1.15□□□□□ -2.23
LIM2P55344 RNU7-172P-201ENST00000517125 64 ntBASIC1.15□□□□□ -2.23
LIM2P55344 AL358944.1-201ENST00000528537 144 ntBASIC1.15□□□□□ -2.23
LIM2P55344 MIR3937-201ENST00000580135 106 ntBASIC1.15□□□□□ -2.23
LIM2P55344 UBE2V2P2-201ENST00000587677 504 ntBASIC1.15□□□□□ -2.23
LIM2P55344 AC073349.3-201ENST00000617616 186 ntBASIC1.15□□□□□ -2.23
LIM2P55344 MIR6079-201ENST00000635807 62 ntBASIC1.15□□□□□ -2.23
LIM2P55344 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
LIM2P55344 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
LIM2P55344 Y_RNA.243-201ENST00000364481 109 ntBASIC1.14□□□□□ -2.23
LIM2P55344 RNU6-1283P-201ENST00000365314 105 ntBASIC1.14□□□□□ -2.23
LIM2P55344 Y_RNA.387-201ENST00000383918 102 ntBASIC1.14□□□□□ -2.23
LIM2P55344 RNY3P4-201ENST00000384428 101 ntBASIC1.14□□□□□ -2.23
LIM2P55344 RNU6-1156P-201ENST00000410365 100 ntBASIC1.14□□□□□ -2.23
LIM2P55344 SNORD12B-201ENST00000410433 91 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AC099799.1-201ENST00000439809 192 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AC092473.1-201ENST00000441098 221 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.14□□□□□ -2.23
LIM2P55344 ELOCP24-201ENST00000456370 334 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AL163540.1-201ENST00000485382 386 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AC022493.2-201ENST00000506122 481 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AC108729.3-201ENST00000513484 108 ntBASIC1.14□□□□□ -2.23
LIM2P55344 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.14□□□□□ -2.23
LIM2P55344 RNU6-470P-201ENST00000515954 104 ntBASIC1.14□□□□□ -2.23
LIM2P55344 RNA5SP20-201ENST00000515976 84 ntBASIC1.14□□□□□ -2.23
LIM2P55344 RNU6-341P-201ENST00000516973 96 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AC023157.2-201ENST00000540596 141 ntBASIC1.14□□□□□ -2.23
LIM2P55344 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.14□□□□□ -2.23
LIM2P55344 AL161722.3-201ENST00000605789 2983 ntBASIC1.14□□□□□ -2.23
LIM2P55344 MIR1244-1-201ENST00000612829 85 ntBASIC1.14□□□□□ -2.23
LIM2P55344 AC087588.2-201ENST00000617667 426 ntBASIC1.14□□□□□ -2.23
LIM2P55344 MIR1244-3-201ENST00000635744 85 ntBASIC1.14□□□□□ -2.23
LIM2P55344 U6.115-201ENST00000636045 103 ntBASIC1.14□□□□□ -2.23
LIM2P55344 MIR1244-2-201ENST00000636449 85 ntBASIC1.14□□□□□ -2.23
LIM2P55344 MIR1244-4-202ENST00000636813 85 ntBASIC1.14□□□□□ -2.23
LIM2P55344 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.14□□□□□ -2.23
LIM2P55344 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
LIM2P55344 Y_RNA.70-201ENST00000362886 110 ntBASIC1.13□□□□□ -2.23
LIM2P55344 Y_RNA.142-201ENST00000363491 102 ntBASIC1.13□□□□□ -2.23
LIM2P55344 RNU6-890P-201ENST00000384121 107 ntBASIC1.13□□□□□ -2.23
LIM2P55344 MIR520G-201ENST00000385064 90 ntBASIC1.13□□□□□ -2.23
LIM2P55344 RPL30P13-201ENST00000418873 348 ntBASIC1.13□□□□□ -2.23
LIM2P55344 AC018865.2-201ENST00000423631 129 ntBASIC1.13□□□□□ -2.23
LIM2P55344 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.13□□□□□ -2.23
LIM2P55344 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.13□□□□□ -2.23
LIM2P55344 AL137792.2-201ENST00000443484 235 ntBASIC1.13□□□□□ -2.23
LIM2P55344 RPL39P38-201ENST00000467018 153 ntBASIC1.13□□□□□ -2.23
LIM2P55344 RNU6-559P-201ENST00000516151 98 ntBASIC1.13□□□□□ -2.23
LIM2P55344 RNU6-1213P-201ENST00000517075 94 ntBASIC1.13□□□□□ -2.23
LIM2P55344 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.13□□□□□ -2.23
LIM2P55344 MIR4498-201ENST00000577599 66 ntBASIC1.13□□□□□ -2.23
LIM2P55344 PRR13P7-201ENST00000605538 430 ntBASIC1.13□□□□□ -2.23
LIM2P55344 AL050343.2-201ENST00000607338 280 ntBASIC1.13□□□□□ -2.23
LIM2P55344 AL078604.3-201ENST00000615580 211 ntBASIC1.13□□□□□ -2.23
LIM2P55344 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.13□□□□□ -2.23
LIM2P55344 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.12□□□□□ -2.23
LIM2P55344 RNU6-490P-201ENST00000362985 107 ntBASIC1.12□□□□□ -2.23
LIM2P55344 MIR660-201ENST00000385235 97 ntBASIC1.12□□□□□ -2.23
LIM2P55344 RPL23AP36-201ENST00000413895 458 ntBASIC1.12□□□□□ -2.23
LIM2P55344 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.12□□□□□ -2.23
LIM2P55344 FCF1P4-201ENST00000448326 183 ntBASIC1.12□□□□□ -2.23
LIM2P55344 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.12□□□□□ -2.23
LIM2P55344 FGF7P4-201ENST00000509595 295 ntBASIC1.12□□□□□ -2.23
LIM2P55344 SNORA70.12-201ENST00000516084 153 ntBASIC1.12□□□□□ -2.23
LIM2P55344 AP002004.2-201ENST00000531656 154 ntBASIC1.12□□□□□ -2.23
LIM2P55344 Y_RNA.338-201ENST00000365320 114 ntBASIC1.11□□□□□ -2.23
LIM2P55344 RNU6-117P-201ENST00000365415 107 ntBASIC1.11□□□□□ -2.23
LIM2P55344 RNA5SP259-201ENST00000365541 109 ntBASIC1.11□□□□□ -2.23
LIM2P55344 Y_RNA.384-201ENST00000383909 102 ntBASIC1.11□□□□□ -2.23
LIM2P55344 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.11□□□□□ -2.23
LIM2P55344 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.11□□□□□ -2.23
LIM2P55344 AC019176.1-201ENST00000518519 225 ntBASIC1.11□□□□□ -2.23
LIM2P55344 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.11□□□□□ -2.23
LIM2P55344 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.11□□□□□ -2.23
LIM2P55344 AP002001.1-203ENST00000534002 267 ntBASIC1.11□□□□□ -2.23
LIM2P55344 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.11□□□□□ -2.23
LIM2P55344 AC091178.2-201ENST00000584401 117 ntBASIC1.11□□□□□ -2.23
LIM2P55344 RBM11P1-201ENST00000604951 799 ntBASIC1.11□□□□□ -2.23
LIM2P55344 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LIM2P55344 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LIM2P55344 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LIM2P55344 RNU6-454P-201ENST00000364292 107 ntBASIC1.1□□□□□ -2.23
LIM2P55344 Y_RNA.327-201ENST00000365201 102 ntBASIC1.1□□□□□ -2.23
LIM2P55344 SNORA12.1-201ENST00000390873 148 ntBASIC1.1□□□□□ -2.23
LIM2P55344 SNORD78.2-201ENST00000391076 69 ntBASIC1.1□□□□□ -2.23
LIM2P55344 RNY4P36-201ENST00000391116 96 ntBASIC1.1□□□□□ -2.23
LIM2P55344 RNA5SP482-201ENST00000391269 118 ntBASIC1.1□□□□□ -2.23
LIM2P55344 RNU5A-5P-201ENST00000411054 116 ntBASIC1.1□□□□□ -2.23
LIM2P55344 HSPE1P13-201ENST00000451143 297 ntBASIC1.1□□□□□ -2.23
LIM2P55344 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
LIM2P55344 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
LIM2P55344 RNU6-277P-201ENST00000516272 106 ntBASIC1.1□□□□□ -2.23
LIM2P55344 RNU2-12P-201ENST00000517216 168 ntBASIC1.1□□□□□ -2.23
LIM2P55344 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.1□□□□□ -2.23
LIM2P55344 AL512310.8-201ENST00000550183 120 ntBASIC1.1□□□□□ -2.23
LIM2P55344 AL365434.2-201ENST00000607979 234 ntBASIC1.1□□□□□ -2.23
LIM2P55344 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
LIM2P55344 AC127459.3-201ENST00000624328 466 ntBASIC1.1□□□□□ -2.23
LIM2P55344 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
LIM2P55344 MIR337-201ENST00000362281 93 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms