Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP1B1P2-201ENST00000416196 106 ntBASIC1.7□□□□□ -2.14
PDX1P52945 RNA5SP233-201ENST00000459153 113 ntBASIC1.7□□□□□ -2.14
PDX1P52945 RNA5SP57-201ENST00000459463 123 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AC093852.1-201ENST00000503587 266 ntBASIC1.7□□□□□ -2.14
PDX1P52945 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PDX1P52945 RNU6-1146P-201ENST00000516282 102 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.7□□□□□ -2.14
PDX1P52945 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.7□□□□□ -2.14
PDX1P52945 AC005176.2-201ENST00000596933 147 ntBASIC1.7□□□□□ -2.14
PDX1P52945 RPS29P30-201ENST00000600975 111 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AC016925.2-201ENST00000605108 242 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AL121655.1-201ENST00000605811 308 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AC005828.6-201ENST00000606610 232 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AC010205.1-201ENST00000616668 449 ntBASIC1.7□□□□□ -2.14
PDX1P52945 AC008555.8-201ENST00000623602 2168 ntBASIC1.7□□□□□ -2.14
PDX1P52945 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.7□□□□□ -2.14
PDX1P52945 SNORD115-30-201ENST00000364117 82 ntBASIC1.69□□□□□ -2.14
PDX1P52945 RNU6-823P-201ENST00000391042 103 ntBASIC1.69□□□□□ -2.14
PDX1P52945 RNA5SP475-201ENST00000410568 110 ntBASIC1.69□□□□□ -2.14
PDX1P52945 HMGN2P19-201ENST00000425149 265 ntBASIC1.69□□□□□ -2.14
PDX1P52945 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.69□□□□□ -2.14
PDX1P52945 AL606517.2-201ENST00000442855 241 ntBASIC1.69□□□□□ -2.14
PDX1P52945 MRPS10P1-201ENST00000448483 130 ntBASIC1.69□□□□□ -2.14
PDX1P52945 RNU6-1137P-201ENST00000517073 99 ntBASIC1.69□□□□□ -2.14
PDX1P52945 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.69□□□□□ -2.14
PDX1P52945 AC084364.2-201ENST00000546924 395 ntBASIC1.69□□□□□ -2.14
PDX1P52945 MIR4680-201ENST00000580906 66 ntBASIC1.69□□□□□ -2.14
PDX1P52945 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.69□□□□□ -2.14
PDX1P52945 AC124312.5-201ENST00000604451 268 ntBASIC1.69□□□□□ -2.14
PDX1P52945 RAC1P9-201ENST00000604990 392 ntBASIC1.69□□□□□ -2.14
PDX1P52945 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PDX1P52945 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PDX1P52945 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.68□□□□□ -2.14
PDX1P52945 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PDX1P52945 RNU4-50P-201ENST00000364361 141 ntBASIC1.68□□□□□ -2.14
PDX1P52945 RNU6-1019P-201ENST00000364424 107 ntBASIC1.68□□□□□ -2.14
PDX1P52945 SNORA72.2-201ENST00000365028 127 ntBASIC1.68□□□□□ -2.14
PDX1P52945 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
PDX1P52945 Y_RNA.527-201ENST00000384573 102 ntBASIC1.68□□□□□ -2.14
PDX1P52945 Y_RNA.570-201ENST00000384750 101 ntBASIC1.68□□□□□ -2.14
PDX1P52945 RNU6-1186P-201ENST00000410429 97 ntBASIC1.68□□□□□ -2.14
PDX1P52945 RNU6-1199P-201ENST00000411249 104 ntBASIC1.68□□□□□ -2.14
PDX1P52945 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.68□□□□□ -2.14
PDX1P52945 AC010598.1-201ENST00000510378 103 ntBASIC1.68□□□□□ -2.14
PDX1P52945 RNU6-397P-201ENST00000516226 104 ntBASIC1.68□□□□□ -2.14
PDX1P52945 Y_RNA.715-201ENST00000517082 110 ntBASIC1.68□□□□□ -2.14
PDX1P52945 AP003072.1-201ENST00000531740 145 ntBASIC1.68□□□□□ -2.14
PDX1P52945 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
PDX1P52945 MIR4423-201ENST00000580922 80 ntBASIC1.68□□□□□ -2.14
PDX1P52945 MIR4438-201ENST00000585271 93 ntBASIC1.68□□□□□ -2.14
PDX1P52945 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
PDX1P52945 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.68□□□□□ -2.14
PDX1P52945 AC040896.1-201ENST00000613819 479 ntBASIC1.68□□□□□ -2.14
PDX1P52945 U6.73-201ENST00000619194 103 ntBASIC1.68□□□□□ -2.14
PDX1P52945 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PDX1P52945 SNORA27.1-201ENST00000362604 124 ntBASIC1.67□□□□□ -2.14
PDX1P52945 SNORA63D-201ENST00000364359 132 ntBASIC1.67□□□□□ -2.14
PDX1P52945 Y_RNA.243-201ENST00000364481 109 ntBASIC1.67□□□□□ -2.14
PDX1P52945 RNU6-407P-201ENST00000365280 104 ntBASIC1.67□□□□□ -2.14
PDX1P52945 Y_RNA.361-201ENST00000365515 120 ntBASIC1.67□□□□□ -2.14
PDX1P52945 Y_RNA.424-201ENST00000384063 103 ntBASIC1.67□□□□□ -2.14
PDX1P52945 RNU6-937P-201ENST00000384325 106 ntBASIC1.67□□□□□ -2.14
PDX1P52945 Y_RNA.526-201ENST00000384572 110 ntBASIC1.67□□□□□ -2.14
PDX1P52945 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
PDX1P52945 AC005534.2-201ENST00000431047 433 ntBASIC1.67□□□□□ -2.14
PDX1P52945 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.67□□□□□ -2.14
PDX1P52945 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
PDX1P52945 RPS27P22-201ENST00000478056 241 ntBASIC1.67□□□□□ -2.14
PDX1P52945 AC097462.1-201ENST00000514125 324 ntBASIC1.67□□□□□ -2.14
PDX1P52945 AL137100.2-201ENST00000555786 315 ntBASIC1.67□□□□□ -2.14
PDX1P52945 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.67□□□□□ -2.14
PDX1P52945 AC136932.1-201ENST00000574771 208 ntBASIC1.67□□□□□ -2.14
PDX1P52945 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
PDX1P52945 AL359821.1-201ENST00000605519 182 ntBASIC1.67□□□□□ -2.14
PDX1P52945 Y_RNA.772-201ENST00000606692 102 ntBASIC1.67□□□□□ -2.14
PDX1P52945 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.67□□□□□ -2.14
PDX1P52945 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.67□□□□□ -2.14
PDX1P52945 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PDX1P52945 AC010615.1-201ENST00000594254 1764 ntBASIC1.67□□□□□ -2.14
PDX1P52945 RNU6-1175P-201ENST00000365200 107 ntBASIC1.66□□□□□ -2.14
PDX1P52945 SNORA33.2-201ENST00000365413 134 ntBASIC1.66□□□□□ -2.14
PDX1P52945 Y_RNA.389-201ENST00000383924 113 ntBASIC1.66□□□□□ -2.14
PDX1P52945 RNU6-1310P-201ENST00000384153 107 ntBASIC1.66□□□□□ -2.14
PDX1P52945 Y_RNA.446-201ENST00000384178 104 ntBASIC1.66□□□□□ -2.14
PDX1P52945 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PDX1P52945 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
PDX1P52945 RNU2-54P-201ENST00000410299 190 ntBASIC1.66□□□□□ -2.14
PDX1P52945 RPS26P45-201ENST00000471748 340 ntBASIC1.66□□□□□ -2.14
PDX1P52945 AC010655.3-201ENST00000478818 450 ntBASIC1.66□□□□□ -2.14
PDX1P52945 AL163195.1-201ENST00000496941 348 ntBASIC1.66□□□□□ -2.14
PDX1P52945 RNU6-155P-201ENST00000516347 100 ntBASIC1.66□□□□□ -2.14
PDX1P52945 RNU6-1046P-201ENST00000516538 107 ntBASIC1.66□□□□□ -2.14
PDX1P52945 AC022616.4-201ENST00000522985 181 ntBASIC1.66□□□□□ -2.14
PDX1P52945 AL627230.6-201ENST00000611129 280 ntBASIC1.66□□□□□ -2.14
PDX1P52945 AL359075.3-201ENST00000613288 217 ntBASIC1.66□□□□□ -2.14
PDX1P52945 AC006435.5-201ENST00000624486 112 ntBASIC1.66□□□□□ -2.14
PDX1P52945 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.66□□□□□ -2.14
PDX1P52945 RNU1-22P-201ENST00000363334 158 ntBASIC1.65□□□□□ -2.15
PDX1P52945 Y_RNA.143-201ENST00000363520 106 ntBASIC1.65□□□□□ -2.15
PDX1P52945 Y_RNA.158-201ENST00000363651 101 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms