Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 UQCRBP2-201ENST00000447827 297 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU6-625P-201ENST00000459412 107 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU6-570P-201ENST00000517051 105 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.06□□□□□ -2.08
CLCN3P51790 MIR3169-201ENST00000578032 83 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 AL590240.4-201ENST00000616908 390 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
CLCN3P51790 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLCN3P51790 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLCN3P51790 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CLCN3P51790 RNA5SP493-201ENST00000364115 91 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 RNU6-454P-201ENST00000364292 107 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 SNORD114-6-201ENST00000364393 72 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 SNORD87-201ENST00000364849 89 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 Y_RNA.446-201ENST00000384178 104 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 Y_RNA.447-201ENST00000384184 113 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 AL390729.2-201ENST00000416137 156 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 BX510359.4-201ENST00000423750 193 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCN3P51790 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCN3P51790 RNU6-1338P-201ENST00000516328 91 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 RNU2-12P-201ENST00000517216 168 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.05□□□□□ -2.08
CLCN3P51790 AC012433.1-201ENST00000588916 398 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 AC007229.1-201ENST00000590455 412 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 SNORD113-5-201ENST00000607261 78 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLCN3P51790 AC008555.8-201ENST00000623602 2168 ntBASIC2.05□□□□□ -2.08
CLCN3P51790 Y_RNA.16-201ENST00000362421 102 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 SNORD115-3-201ENST00000363100 82 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 RNU6-23P-201ENST00000363283 107 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 Y_RNA.188-201ENST00000363952 111 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 RNU6-1175P-201ENST00000365200 107 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 RNU6-290P-201ENST00000365212 101 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 Y_RNA.350-201ENST00000365409 98 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CLCN3P51790 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 HMGB3P17-201ENST00000504195 649 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 RNU1-117P-201ENST00000517041 158 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 AC005786.1-201ENST00000588553 154 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 AC005176.2-201ENST00000596933 147 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 AL109918.3-201ENST00000603072 338 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 MIR8081-201ENST00000611533 95 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 SDR42E1P4-201ENST00000620894 481 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 snoZ196.1-201ENST00000625269 89 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 MIR3674-201ENST00000636576 68 ntBASIC2.04□□□□□ -2.08
CLCN3P51790 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLCN3P51790 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CLCN3P51790 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLCN3P51790 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLCN3P51790 RNU4-90P-201ENST00000362773 141 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 Y_RNA.136-201ENST00000363444 102 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 RNU6-379P-201ENST00000363813 104 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 Y_RNA.237-201ENST00000364439 102 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 MIR548B-201ENST00000385247 97 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 RNU11-3P-201ENST00000391111 133 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 AC096920.1-201ENST00000423991 241 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.03□□□□□ -2.08
CLCN3P51790 RNU7-57P-201ENST00000459540 60 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 SEPT14P8-201ENST00000508026 178 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.03□□□□□ -2.08
CLCN3P51790 RNU6-1023P-201ENST00000516137 106 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 AC005828.6-201ENST00000606610 232 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 AC011373.1-201ENST00000607270 237 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 AC091932.3-201ENST00000624223 323 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 U6.104-201ENST00000637979 90 ntBASIC2.03□□□□□ -2.08
CLCN3P51790 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.03□□□□□ -2.08
CLCN3P51790 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
CLCN3P51790 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CLCN3P51790 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLCN3P51790 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLCN3P51790 Y_RNA.20-201ENST00000362479 113 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 Y_RNA.418-201ENST00000384029 102 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 RNU6-418P-201ENST00000384035 107 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 Y_RNA.498-201ENST00000384460 102 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 RNU4-30P-201ENST00000410245 143 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 RNU2-54P-201ENST00000410299 190 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 Y_RNA.602-201ENST00000410535 92 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.02□□□□□ -2.09
CLCN3P51790 TOMM22P2-201ENST00000430735 237 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 RNU6-221P-201ENST00000459541 99 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.02□□□□□ -2.09
CLCN3P51790 RNU6-1271P-201ENST00000517049 105 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 RNU6-794P-201ENST00000517261 64 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.02□□□□□ -2.09
CLCN3P51790 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.02□□□□□ -2.09
CLCN3P51790 AL353149.1-201ENST00000610667 244 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 AC004467.1-201ENST00000615678 330 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
CLCN3P51790 AL159152.1-201ENST00000635019 2587 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 Y_RNA.243-201ENST00000364481 109 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 RNU6-326P-201ENST00000365480 107 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 RNU6-1310P-201ENST00000384153 107 ntBASIC2.01□□□□□ -2.09
CLCN3P51790 Y_RNA.539-201ENST00000384635 107 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms