Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC093010.3-201ENST00000570269 15214 ntBASIC3.39□□□□□ -1.87
USP11P51784 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP11P51784 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP11P51784 RNU6-851P-201ENST00000384565 107 ntBASIC3.38□□□□□ -1.87
USP11P51784 AL603914.1-201ENST00000401964 204 ntBASIC3.38□□□□□ -1.87
USP11P51784 Z98742.2-201ENST00000431564 187 ntBASIC3.38□□□□□ -1.87
USP11P51784 UQCRHP3-201ENST00000451503 251 ntBASIC3.38□□□□□ -1.87
USP11P51784 RPS26P45-201ENST00000471748 340 ntBASIC3.38□□□□□ -1.87
USP11P51784 ATP5EP1-201ENST00000510257 156 ntBASIC3.38□□□□□ -1.87
USP11P51784 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.38□□□□□ -1.87
USP11P51784 AC007536.1-201ENST00000533382 349 ntBASIC3.38□□□□□ -1.87
USP11P51784 uc_338.14-201ENST00000613162 166 ntBASIC3.38□□□□□ -1.87
USP11P51784 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
USP11P51784 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP11P51784 AC092435.3-201ENST00000565538 3654 ntBASIC3.37□□□□□ -1.87
USP11P51784 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
USP11P51784 RNU1-105P-201ENST00000363470 161 ntBASIC3.37□□□□□ -1.87
USP11P51784 RNU6-975P-201ENST00000384296 105 ntBASIC3.37□□□□□ -1.87
USP11P51784 SNORA26.7-201ENST00000391288 122 ntBASIC3.37□□□□□ -1.87
USP11P51784 MIR300-201ENST00000401138 83 ntBASIC3.37□□□□□ -1.87
USP11P51784 RNU6-57P-201ENST00000411348 103 ntBASIC3.37□□□□□ -1.87
USP11P51784 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.37□□□□□ -1.87
USP11P51784 AC097463.2-201ENST00000421074 142 ntBASIC3.37□□□□□ -1.87
USP11P51784 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.37□□□□□ -1.87
USP11P51784 Y_RNA.651-201ENST00000459380 103 ntBASIC3.37□□□□□ -1.87
USP11P51784 RN7SL633P-201ENST00000488974 297 ntBASIC3.37□□□□□ -1.87
USP11P51784 Y_RNA.690-201ENST00000516603 95 ntBASIC3.37□□□□□ -1.87
USP11P51784 AC107016.2-201ENST00000547968 190 ntBASIC3.37□□□□□ -1.87
USP11P51784 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
USP11P51784 AC006254.2-201ENST00000603259 279 ntBASIC3.37□□□□□ -1.87
USP11P51784 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP11P51784 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP11P51784 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.37□□□□□ -1.87
USP11P51784 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
USP11P51784 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP11P51784 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP11P51784 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.36□□□□□ -1.87
USP11P51784 Y_RNA.634-201ENST00000364811 113 ntBASIC3.36□□□□□ -1.87
USP11P51784 CD24P4-201ENST00000382840 243 ntBASIC3.36□□□□□ -1.87
USP11P51784 RNU6-1080P-201ENST00000383982 107 ntBASIC3.36□□□□□ -1.87
USP11P51784 SNORA44-201ENST00000384584 132 ntBASIC3.36□□□□□ -1.87
USP11P51784 RNU6-136P-201ENST00000384663 107 ntBASIC3.36□□□□□ -1.87
USP11P51784 MIRLET7F2-201ENST00000385277 83 ntBASIC3.36□□□□□ -1.87
USP11P51784 MIR548A3-201ENST00000385297 97 ntBASIC3.36□□□□□ -1.87
USP11P51784 MIR887-201ENST00000401258 79 ntBASIC3.36□□□□□ -1.87
USP11P51784 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.36□□□□□ -1.87
USP11P51784 RPL39P40-201ENST00000445481 146 ntBASIC3.36□□□□□ -1.87
USP11P51784 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.36□□□□□ -1.87
USP11P51784 SNORD77.4-201ENST00000516158 81 ntBASIC3.36□□□□□ -1.87
USP11P51784 RNA5SP153-201ENST00000516498 76 ntBASIC3.36□□□□□ -1.87
USP11P51784 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.36□□□□□ -1.87
USP11P51784 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.36□□□□□ -1.87
USP11P51784 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP11P51784 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.36□□□□□ -1.87
USP11P51784 AC008555.8-201ENST00000623602 2168 ntBASIC3.36□□□□□ -1.87
USP11P51784 AC096644.4-201ENST00000563417 2912 ntBASIC3.36□□□□□ -1.87
USP11P51784 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
USP11P51784 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP11P51784 AC083906.5-201ENST00000503722 328 ntBASIC3.35□□□□□ -1.87
USP11P51784 AC025647.1-201ENST00000517879 253 ntBASIC3.35□□□□□ -1.87
USP11P51784 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.35□□□□□ -1.87
USP11P51784 MIR5582-201ENST00000579697 68 ntBASIC3.35□□□□□ -1.87
USP11P51784 AC091178.2-201ENST00000584401 117 ntBASIC3.35□□□□□ -1.87
USP11P51784 MIR4753-201ENST00000585119 83 ntBASIC3.35□□□□□ -1.87
USP11P51784 AC008739.2-201ENST00000597006 317 ntBASIC3.35□□□□□ -1.87
USP11P51784 AC097639.2-201ENST00000603159 172 ntBASIC3.35□□□□□ -1.87
USP11P51784 uc_338.4-201ENST00000616635 176 ntBASIC3.35□□□□□ -1.87
USP11P51784 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.35□□□□□ -1.87
USP11P51784 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.35□□□□□ -1.87
USP11P51784 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.35□□□□□ -1.87
USP11P51784 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.35□□□□□ -1.87
USP11P51784 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP11P51784 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP11P51784 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
USP11P51784 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.35□□□□□ -1.87
USP11P51784 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP11P51784 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.34□□□□□ -1.87
USP11P51784 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP11P51784 RNU6-944P-201ENST00000364023 107 ntBASIC3.34□□□□□ -1.87
USP11P51784 SNORA72-201ENST00000384339 132 ntBASIC3.34□□□□□ -1.87
USP11P51784 MIR181A2-201ENST00000384863 110 ntBASIC3.34□□□□□ -1.87
USP11P51784 U6atac.2-201ENST00000408644 118 ntBASIC3.34□□□□□ -1.87
USP11P51784 AC016909.1-201ENST00000415916 166 ntBASIC3.34□□□□□ -1.87
USP11P51784 AC245102.2-201ENST00000448956 180 ntBASIC3.34□□□□□ -1.87
USP11P51784 EIF4BP1-201ENST00000554881 351 ntBASIC3.34□□□□□ -1.87
USP11P51784 RPL23AP91-201ENST00000569211 455 ntBASIC3.34□□□□□ -1.87
USP11P51784 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
USP11P51784 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
USP11P51784 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP11P51784 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
USP11P51784 AL136360.1-201ENST00000503377 1900 ntBASIC3.33□□□□□ -1.88
USP11P51784 AL365361.1-201ENST00000566942 3481 ntBASIC3.33□□□□□ -1.88
USP11P51784 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
USP11P51784 MIR29B2-201ENST00000385055 81 ntBASIC3.33□□□□□ -1.88
USP11P51784 RNU2-70P-201ENST00000410718 179 ntBASIC3.33□□□□□ -1.88
USP11P51784 COTL1P1-201ENST00000422309 375 ntBASIC3.33□□□□□ -1.88
USP11P51784 AC022018.1-201ENST00000430685 241 ntBASIC3.33□□□□□ -1.88
USP11P51784 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.33□□□□□ -1.88
USP11P51784 SNORD11-201ENST00000459124 84 ntBASIC3.33□□□□□ -1.88
USP11P51784 RN7SKP19-201ENST00000516016 252 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms