Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AP002001.1-203ENST00000534002 267 ntBASIC1.14□□□□□ -2.23
LHX2P50458 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.14□□□□□ -2.23
LHX2P50458 AL442163.3-201ENST00000554110 156 ntBASIC1.14□□□□□ -2.23
LHX2P50458 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
LHX2P50458 MIR3684-201ENST00000579779 74 ntBASIC1.14□□□□□ -2.23
LHX2P50458 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.14□□□□□ -2.23
LHX2P50458 PRR13P7-201ENST00000605538 430 ntBASIC1.14□□□□□ -2.23
LHX2P50458 RNU6-454P-201ENST00000364292 107 ntBASIC1.13□□□□□ -2.23
LHX2P50458 SNORA20B-201ENST00000384220 132 ntBASIC1.13□□□□□ -2.23
LHX2P50458 RNA5SP323-201ENST00000391094 133 ntBASIC1.13□□□□□ -2.23
LHX2P50458 RNU6-1186P-201ENST00000410429 97 ntBASIC1.13□□□□□ -2.23
LHX2P50458 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.13□□□□□ -2.23
LHX2P50458 FTH1P12-201ENST00000432137 551 ntBASIC1.13□□□□□ -2.23
LHX2P50458 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
LHX2P50458 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.13□□□□□ -2.23
LHX2P50458 RNU6-625P-201ENST00000459412 107 ntBASIC1.13□□□□□ -2.23
LHX2P50458 RPS26P45-201ENST00000471748 340 ntBASIC1.13□□□□□ -2.23
LHX2P50458 AC010469.2-201ENST00000496412 480 ntBASIC1.13□□□□□ -2.23
LHX2P50458 RNU6-408P-201ENST00000515910 100 ntBASIC1.13□□□□□ -2.23
LHX2P50458 RNU6-911P-201ENST00000516523 104 ntBASIC1.13□□□□□ -2.23
LHX2P50458 RNU7-128P-201ENST00000517247 62 ntBASIC1.13□□□□□ -2.23
LHX2P50458 MIR4795-201ENST00000584182 89 ntBASIC1.13□□□□□ -2.23
LHX2P50458 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
LHX2P50458 AC091925.1-201ENST00000623204 462 ntBASIC1.13□□□□□ -2.23
LHX2P50458 MIR3674-201ENST00000636576 68 ntBASIC1.13□□□□□ -2.23
LHX2P50458 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LHX2P50458 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LHX2P50458 RNU4-79P-201ENST00000362764 141 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RNU6-414P-201ENST00000363705 104 ntBASIC1.12□□□□□ -2.23
LHX2P50458 Y_RNA.164-201ENST00000363709 102 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RNU6-961P-201ENST00000363893 105 ntBASIC1.12□□□□□ -2.23
LHX2P50458 SNORA4.2-201ENST00000365313 147 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RNU6-1310P-201ENST00000384153 107 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RNY3P4-201ENST00000384428 101 ntBASIC1.12□□□□□ -2.23
LHX2P50458 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
LHX2P50458 MT-TD-201ENST00000387419 68 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.12□□□□□ -2.23
LHX2P50458 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LHX2P50458 RNA5SP109-201ENST00000391010 116 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RPL21P1-201ENST00000399532 476 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RPL30P13-201ENST00000418873 348 ntBASIC1.12□□□□□ -2.23
LHX2P50458 RAB28P5-201ENST00000427490 651 ntBASIC1.12□□□□□ -2.23
LHX2P50458 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.12□□□□□ -2.23
LHX2P50458 AC005002.2-201ENST00000438228 269 ntBASIC1.12□□□□□ -2.23
LHX2P50458 JTBP1-201ENST00000441314 247 ntBASIC1.12□□□□□ -2.23
LHX2P50458 AL606517.2-201ENST00000442855 241 ntBASIC1.12□□□□□ -2.23
LHX2P50458 CHEK2P4-201ENST00000450340 246 ntBASIC1.12□□□□□ -2.23
LHX2P50458 snoU13.27-201ENST00000459278 104 ntBASIC1.12□□□□□ -2.23
LHX2P50458 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.12□□□□□ -2.23
LHX2P50458 Y_RNA.676-201ENST00000516393 96 ntBASIC1.12□□□□□ -2.23
LHX2P50458 AC027419.1-201ENST00000522976 328 ntBASIC1.12□□□□□ -2.23
LHX2P50458 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.12□□□□□ -2.23
LHX2P50458 RAB11AP2-201ENST00000545905 639 ntBASIC1.12□□□□□ -2.23
LHX2P50458 MIR4438-201ENST00000585271 93 ntBASIC1.12□□□□□ -2.23
LHX2P50458 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
LHX2P50458 AC022217.4-201ENST00000604389 163 ntBASIC1.12□□□□□ -2.23
LHX2P50458 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
LHX2P50458 Y_RNA.804-201ENST00000615262 101 ntBASIC1.12□□□□□ -2.23
LHX2P50458 U2.1-201ENST00000618978 145 ntBASIC1.12□□□□□ -2.23
LHX2P50458 AC095038.3-201ENST00000634439 195 ntBASIC1.12□□□□□ -2.23
LHX2P50458 U6.115-201ENST00000636045 103 ntBASIC1.12□□□□□ -2.23
LHX2P50458 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LHX2P50458 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
LHX2P50458 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
LHX2P50458 Y_RNA.5-201ENST00000362334 102 ntBASIC1.11□□□□□ -2.23
LHX2P50458 RNU6-1115P-201ENST00000362490 106 ntBASIC1.11□□□□□ -2.23
LHX2P50458 Y_RNA.428-201ENST00000384078 102 ntBASIC1.11□□□□□ -2.23
LHX2P50458 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.11□□□□□ -2.23
LHX2P50458 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.11□□□□□ -2.23
LHX2P50458 AC096644.2-201ENST00000429278 159 ntBASIC1.11□□□□□ -2.23
LHX2P50458 MRPS10P1-201ENST00000448483 130 ntBASIC1.11□□□□□ -2.23
LHX2P50458 AC005908.1-201ENST00000468701 347 ntBASIC1.11□□□□□ -2.23
LHX2P50458 RPS27P22-201ENST00000478056 241 ntBASIC1.11□□□□□ -2.23
LHX2P50458 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.11□□□□□ -2.23
LHX2P50458 RNU6-1012P-201ENST00000516606 109 ntBASIC1.11□□□□□ -2.23
LHX2P50458 SNORD116.3-201ENST00000517176 78 ntBASIC1.11□□□□□ -2.23
LHX2P50458 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.11□□□□□ -2.23
LHX2P50458 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.11□□□□□ -2.23
LHX2P50458 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.11□□□□□ -2.23
LHX2P50458 AC023157.2-201ENST00000540596 141 ntBASIC1.11□□□□□ -2.23
LHX2P50458 AL117336.2-201ENST00000602435 335 ntBASIC1.11□□□□□ -2.23
LHX2P50458 AC004467.1-201ENST00000615678 330 ntBASIC1.11□□□□□ -2.23
LHX2P50458 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.11□□□□□ -2.23
LHX2P50458 Y_RNA.243-201ENST00000364481 109 ntBASIC1.1□□□□□ -2.23
LHX2P50458 Y_RNA.252-201ENST00000364556 101 ntBASIC1.1□□□□□ -2.23
LHX2P50458 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
LHX2P50458 RNU6-926P-201ENST00000384075 107 ntBASIC1.1□□□□□ -2.23
LHX2P50458 RNU6-708P-201ENST00000384217 107 ntBASIC1.1□□□□□ -2.23
LHX2P50458 Y_RNA.496-201ENST00000384444 101 ntBASIC1.1□□□□□ -2.23
LHX2P50458 MIR194-1-201ENST00000384892 85 ntBASIC1.1□□□□□ -2.23
LHX2P50458 MIR1267-201ENST00000408723 78 ntBASIC1.1□□□□□ -2.23
LHX2P50458 AL161935.2-201ENST00000414627 60 ntBASIC1.1□□□□□ -2.23
LHX2P50458 COX6CP10-201ENST00000416832 224 ntBASIC1.1□□□□□ -2.23
LHX2P50458 FCF1P4-201ENST00000448326 183 ntBASIC1.1□□□□□ -2.23
LHX2P50458 snoU13.9-201ENST00000458927 103 ntBASIC1.1□□□□□ -2.23
LHX2P50458 RNA5SP20-201ENST00000515976 84 ntBASIC1.1□□□□□ -2.23
LHX2P50458 MIR4422-201ENST00000581938 83 ntBASIC1.1□□□□□ -2.23
LHX2P50458 VN1R91P-201ENST00000594377 169 ntBASIC1.1□□□□□ -2.23
LHX2P50458 AC005828.6-201ENST00000606610 232 ntBASIC1.1□□□□□ -2.23
LHX2P50458 AL008636.1-201ENST00000625038 1018 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms