Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNU6-1186P-201ENST00000410429 97 ntBASIC1.99□□□□□ -2.09
CENPAP49450 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.99□□□□□ -2.09
CENPAP49450 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.99□□□□□ -2.09
CENPAP49450 RPL31P63-201ENST00000422565 375 ntBASIC1.99□□□□□ -2.09
CENPAP49450 MTCYBP9-201ENST00000431021 303 ntBASIC1.99□□□□□ -2.09
CENPAP49450 SNORA70.12-201ENST00000516084 153 ntBASIC1.99□□□□□ -2.09
CENPAP49450 RNU6-436P-201ENST00000516171 114 ntBASIC1.99□□□□□ -2.09
CENPAP49450 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.99□□□□□ -2.09
CENPAP49450 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.99□□□□□ -2.09
CENPAP49450 MIR4435-1-201ENST00000582552 80 ntBASIC1.99□□□□□ -2.09
CENPAP49450 MIR4438-201ENST00000585271 93 ntBASIC1.99□□□□□ -2.09
CENPAP49450 DEFB117-201ENST00000602356 141 ntBASIC1.99□□□□□ -2.09
CENPAP49450 MIR8062-201ENST00000621515 85 ntBASIC1.99□□□□□ -2.09
CENPAP49450 AC006435.5-201ENST00000624486 112 ntBASIC1.99□□□□□ -2.09
CENPAP49450 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CENPAP49450 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CENPAP49450 SNORA27.1-201ENST00000362604 124 ntBASIC1.98□□□□□ -2.09
CENPAP49450 Y_RNA.84-201ENST00000363011 104 ntBASIC1.98□□□□□ -2.09
CENPAP49450 Y_RNA.124-201ENST00000363339 93 ntBASIC1.98□□□□□ -2.09
CENPAP49450 Y_RNA.376-201ENST00000365638 108 ntBASIC1.98□□□□□ -2.09
CENPAP49450 RNU6-196P-201ENST00000384315 107 ntBASIC1.98□□□□□ -2.09
CENPAP49450 Y_RNA.569-201ENST00000384749 103 ntBASIC1.98□□□□□ -2.09
CENPAP49450 MIR221-201ENST00000385135 110 ntBASIC1.98□□□□□ -2.09
CENPAP49450 AC024067.1-201ENST00000426199 223 ntBASIC1.98□□□□□ -2.09
CENPAP49450 HSPE1P25-201ENST00000455484 251 ntBASIC1.98□□□□□ -2.09
CENPAP49450 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.98□□□□□ -2.09
CENPAP49450 TRBVB-201ENST00000477100 408 ntBASIC1.98□□□□□ -2.09
CENPAP49450 AC010409.1-201ENST00000487382 476 ntBASIC1.98□□□□□ -2.09
CENPAP49450 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.98□□□□□ -2.09
CENPAP49450 RNA5SP20-201ENST00000515976 84 ntBASIC1.98□□□□□ -2.09
CENPAP49450 MIR3145-201ENST00000580727 82 ntBASIC1.98□□□□□ -2.09
CENPAP49450 AC005828.6-201ENST00000606610 232 ntBASIC1.98□□□□□ -2.09
CENPAP49450 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
CENPAP49450 RNU6-290P-201ENST00000365212 101 ntBASIC1.97□□□□□ -2.09
CENPAP49450 RNU6-505P-201ENST00000384427 107 ntBASIC1.97□□□□□ -2.09
CENPAP49450 Y_RNA.541-201ENST00000384640 113 ntBASIC1.97□□□□□ -2.09
CENPAP49450 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CENPAP49450 SNORA53-201ENST00000391141 249 ntBASIC1.97□□□□□ -2.09
CENPAP49450 RNA5SP467-201ENST00000391274 118 ntBASIC1.97□□□□□ -2.09
CENPAP49450 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
CENPAP49450 MRPS10P1-201ENST00000448483 130 ntBASIC1.97□□□□□ -2.09
CENPAP49450 MIR5094-201ENST00000578766 85 ntBASIC1.97□□□□□ -2.09
CENPAP49450 AC037487.3-201ENST00000606668 112 ntBASIC1.97□□□□□ -2.09
CENPAP49450 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
CENPAP49450 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.97□□□□□ -2.09
CENPAP49450 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
CENPAP49450 RNA5SP289-201ENST00000362332 137 ntBASIC1.96□□□□□ -2.1
CENPAP49450 MIR568-201ENST00000385036 95 ntBASIC1.96□□□□□ -2.1
CENPAP49450 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
CENPAP49450 RNU6-1203P-201ENST00000410703 110 ntBASIC1.96□□□□□ -2.1
CENPAP49450 RNA5SP501-201ENST00000410990 112 ntBASIC1.96□□□□□ -2.1
CENPAP49450 CST2P1-201ENST00000425770 87 ntBASIC1.96□□□□□ -2.1
CENPAP49450 AC099677.2-201ENST00000436385 175 ntBASIC1.96□□□□□ -2.1
CENPAP49450 AC018634.1-201ENST00000437554 401 ntBASIC1.96□□□□□ -2.1
CENPAP49450 RNU1-142P-201ENST00000516682 145 ntBASIC1.96□□□□□ -2.1
CENPAP49450 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
CENPAP49450 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
CENPAP49450 SCARNA24.2-201ENST00000516968 130 ntBASIC1.96□□□□□ -2.1
CENPAP49450 AL161670.1-201ENST00000554348 137 ntBASIC1.96□□□□□ -2.1
CENPAP49450 AL359075.3-201ENST00000613288 217 ntBASIC1.96□□□□□ -2.1
CENPAP49450 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
CENPAP49450 AC022513.1-201ENST00000624512 117 ntBASIC1.96□□□□□ -2.1
CENPAP49450 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.95□□□□□ -2.1
CENPAP49450 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CENPAP49450 Y_RNA.16-201ENST00000362421 102 ntBASIC1.95□□□□□ -2.1
CENPAP49450 Y_RNA.144-201ENST00000363521 113 ntBASIC1.95□□□□□ -2.1
CENPAP49450 RNU6-514P-201ENST00000384208 107 ntBASIC1.95□□□□□ -2.1
CENPAP49450 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
CENPAP49450 RPS26P55-201ENST00000471178 356 ntBASIC1.95□□□□□ -2.1
CENPAP49450 RNVU1-2-201ENST00000516326 135 ntBASIC1.95□□□□□ -2.1
CENPAP49450 RNU7-172P-201ENST00000517125 64 ntBASIC1.95□□□□□ -2.1
CENPAP49450 DEFB108E-201ENST00000524692 240 ntBASIC1.95□□□□□ -2.1
CENPAP49450 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.95□□□□□ -2.1
CENPAP49450 AC069114.2-201ENST00000604699 304 ntBASIC1.95□□□□□ -2.1
CENPAP49450 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.95□□□□□ -2.1
CENPAP49450 U6.73-201ENST00000619194 103 ntBASIC1.95□□□□□ -2.1
CENPAP49450 U1.36-201ENST00000620684 176 ntBASIC1.95□□□□□ -2.1
CENPAP49450 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CENPAP49450 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CENPAP49450 RNU4-80P-201ENST00000363200 141 ntBASIC1.94□□□□□ -2.1
CENPAP49450 SNORA33-201ENST00000363664 130 ntBASIC1.94□□□□□ -2.1
CENPAP49450 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
CENPAP49450 Y_RNA.396-201ENST00000383949 103 ntBASIC1.94□□□□□ -2.1
CENPAP49450 Y_RNA.483-201ENST00000384380 101 ntBASIC1.94□□□□□ -2.1
CENPAP49450 SNORA8-201ENST00000384574 139 ntBASIC1.94□□□□□ -2.1
CENPAP49450 MIR515-2-201ENST00000384883 83 ntBASIC1.94□□□□□ -2.1
CENPAP49450 MIR515-1-201ENST00000384884 83 ntBASIC1.94□□□□□ -2.1
CENPAP49450 MT-TW-201ENST00000387382 68 ntBASIC1.94□□□□□ -2.1
CENPAP49450 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CENPAP49450 RNU6-855P-201ENST00000410395 104 ntBASIC1.94□□□□□ -2.1
CENPAP49450 RNU6-710P-201ENST00000410424 105 ntBASIC1.94□□□□□ -2.1
CENPAP49450 AC244636.1-201ENST00000421152 228 ntBASIC1.94□□□□□ -2.1
CENPAP49450 OOSP1P1-201ENST00000423265 274 ntBASIC1.94□□□□□ -2.1
CENPAP49450 AC010154.1-201ENST00000425857 269 ntBASIC1.94□□□□□ -2.1
CENPAP49450 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
CENPAP49450 RPS29P21-201ENST00000496272 170 ntBASIC1.94□□□□□ -2.1
CENPAP49450 RNU2-31P-201ENST00000516954 155 ntBASIC1.94□□□□□ -2.1
CENPAP49450 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
CENPAP49450 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.94□□□□□ -2.1
CENPAP49450 MIR3124-201ENST00000582636 67 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms