Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL160004.2-201ENST00000432935 350 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.47□□□□□ -2.17
BRCC3P46736 AC005002.2-201ENST00000438228 269 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 AC074133.1-201ENST00000515696 183 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 RNU6-976P-201ENST00000516086 111 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 RNA5SP437-201ENST00000517249 129 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 AC084364.2-201ENST00000546924 395 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 U6.92-201ENST00000636464 89 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 Y_RNA.101-201ENST00000363154 102 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNY1P10-201ENST00000363268 113 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 Y_RNA.216-201ENST00000364205 93 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 SNORA63D-201ENST00000364359 132 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 MIR520A-201ENST00000384862 85 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNU6-360P-201ENST00000390944 104 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNA5SP247-201ENST00000411181 105 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 MTND1P14-201ENST00000427400 950 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AL606517.2-201ENST00000442855 241 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNU6-625P-201ENST00000459412 107 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 HMGN1P13-201ENST00000505795 138 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AC025465.3-201ENST00000510570 311 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNU6-1170P-201ENST00000515974 106 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNU6-1153P-201ENST00000516760 105 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 MIR2355-201ENST00000517199 87 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 RNU7-128P-201ENST00000517247 62 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.46□□□□□ -2.18
BRCC3P46736 MIR4659A-201ENST00000580269 81 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 MIR8074-201ENST00000615081 81 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AC090971.5-201ENST00000621102 293 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AC090574.1-201ENST00000623186 233 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AL606534.2-204ENST00000635008 178 ntBASIC1.46□□□□□ -2.18
BRCC3P46736 AC010615.1-201ENST00000594254 1764 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 MIR410-201ENST00000362222 80 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 MIR337-201ENST00000362281 93 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 RNU5F-3P-201ENST00000363767 117 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 RNU6-1264P-201ENST00000383891 107 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 Y_RNA.645-201ENST00000391229 102 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 MCFD2P1-201ENST00000417812 300 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 AC069257.2-201ENST00000441819 155 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 MTND4P19-201ENST00000446659 478 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 AC074290.1-201ENST00000448883 135 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 AL163195.1-201ENST00000496941 348 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.45□□□□□ -2.18
BRCC3P46736 VN1R91P-201ENST00000594377 169 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.45□□□□□ -2.18
BRCC3P46736 AC004467.1-201ENST00000615678 330 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 AC240442.1-201ENST00000616055 283 ntBASIC1.45□□□□□ -2.18
BRCC3P46736 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.45□□□□□ -2.18
BRCC3P46736 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
BRCC3P46736 RNU6-626P-201ENST00000363354 107 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 Y_RNA.148-201ENST00000363557 117 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 RNU1-115P-201ENST00000365329 160 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 RNU6-338P-201ENST00000383888 105 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 SNORA20B-201ENST00000384220 132 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
BRCC3P46736 RNU6-1199P-201ENST00000411249 104 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 EBAG9P1-201ENST00000418955 543 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 TOMM22P2-201ENST00000430735 237 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 FTH1P12-201ENST00000432137 551 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 RNU1-123P-201ENST00000458950 160 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 AC023442.1-201ENST00000531247 422 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 AC023157.2-201ENST00000540596 141 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.44□□□□□ -2.18
BRCC3P46736 AL021879.1-201ENST00000611756 288 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 MIR8070-201ENST00000616510 88 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.44□□□□□ -2.18
BRCC3P46736 U6.115-201ENST00000636045 103 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 MIR3674-201ENST00000636576 68 ntBASIC1.44□□□□□ -2.18
BRCC3P46736 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
BRCC3P46736 Y_RNA.27-201ENST00000362540 103 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 RNU6-392P-201ENST00000364926 101 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 SNORA4.2-201ENST00000365313 147 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 Y_RNA.431-201ENST00000384086 102 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 RNU6-20P-201ENST00000384106 107 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 Y_RNA.458-201ENST00000384240 102 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 Y_RNA.460-201ENST00000384255 102 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 MIR515-2-201ENST00000384883 83 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 MIR515-1-201ENST00000384884 83 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 MIR1253-201ENST00000408273 105 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 RNU6-130P-201ENST00000411112 103 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.43□□□□□ -2.18
BRCC3P46736 AC010655.3-201ENST00000478818 450 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 RNU6-911P-201ENST00000516523 104 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 RNA5SP481-201ENST00000516814 122 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 RN7SKP295-201ENST00000517264 153 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 CYCSP23-201ENST00000519781 313 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.43□□□□□ -2.18
BRCC3P46736 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.43□□□□□ -2.18
BRCC3P46736 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 AC020661.2-201ENST00000560114 134 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.43□□□□□ -2.18
BRCC3P46736 AC104695.3-201ENST00000604052 296 ntBASIC1.43□□□□□ -2.18
BRCC3P46736 U6.73-201ENST00000619194 103 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms