Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 RNA5SP20-201ENST00000515976 84 ntBASIC-0.3□□□□□ -2.46
NCAPD3P42695 SNORA40.12-201ENST00000516329 111 ntBASIC-0.3□□□□□ -2.46
NCAPD3P42695 MIR4804-201ENST00000581683 73 ntBASIC-0.3□□□□□ -2.46
NCAPD3P42695 RBM11P1-201ENST00000604951 799 ntBASIC-0.3□□□□□ -2.46
NCAPD3P42695 AC008873.1-201ENST00000625051 138 ntBASIC-0.3□□□□□ -2.46
NCAPD3P42695 MTND4P9-201ENST00000507819 1346 ntBASIC-0.31□□□□□ -2.46
NCAPD3P42695 RNU6-396P-201ENST00000365369 105 ntBASIC-0.31□□□□□ -2.46
NCAPD3P42695 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.31□□□□□ -2.46
NCAPD3P42695 MIR145-201ENST00000384967 88 ntBASIC-0.31□□□□□ -2.46
NCAPD3P42695 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.31□□□□□ -2.46
NCAPD3P42695 RNA5SP94-201ENST00000516917 108 ntBASIC-0.31□□□□□ -2.46
NCAPD3P42695 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.31□□□□□ -2.46
NCAPD3P42695 MTND4P33-201ENST00000556706 766 ntBASIC-0.31□□□□□ -2.46
NCAPD3P42695 AC006435.5-201ENST00000624486 112 ntBASIC-0.31□□□□□ -2.46
NCAPD3P42695 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 RNU6-245P-201ENST00000384020 107 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 RNU6-376P-201ENST00000384731 106 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 MIR452-201ENST00000385020 85 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 MIR643-201ENST00000385267 97 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
NCAPD3P42695 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 MIR450B-201ENST00000401182 78 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 MTND1P26-201ENST00000440488 538 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.32□□□□□ -2.46
NCAPD3P42695 RNU7-43P-201ENST00000516554 64 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 AP003168.1-201ENST00000530091 307 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 AC023442.1-201ENST00000531247 422 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 MTCO3P23-201ENST00000561363 289 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 MIR4703-201ENST00000577728 79 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.32□□□□□ -2.46
NCAPD3P42695 SNORD14.1-201ENST00000365609 90 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 RNU6-541P-201ENST00000384709 110 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 AC243428.1-201ENST00000421099 264 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 RNU7-167P-201ENST00000459160 62 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 U8.21-201ENST00000459536 136 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.33□□□□□ -2.46
NCAPD3P42695 RNU6-107P-201ENST00000516643 102 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.33□□□□□ -2.46
NCAPD3P42695 MIR4509-3-201ENST00000578671 94 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 MIR548AR-201ENST00000582191 57 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 MIR4509-2-201ENST00000583920 94 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 AC120024.3-201ENST00000603167 156 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 AP000811.1-201ENST00000603803 651 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 AC018714.1-201ENST00000605028 208 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 AC087683.2-201ENST00000611384 326 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 U2.17-201ENST00000611454 95 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 MIR4509-1-201ENST00000618224 94 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 uc_338.16-201ENST00000621804 95 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 MIR1295B-201ENST00000636144 60 ntBASIC-0.33□□□□□ -2.46
NCAPD3P42695 RNU6-407P-201ENST00000365280 104 ntBASIC-0.34□□□□□ -2.46
NCAPD3P42695 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.34□□□□□ -2.46
NCAPD3P42695 SNORA20B-201ENST00000384220 132 ntBASIC-0.34□□□□□ -2.46
NCAPD3P42695 AC015818.7-201ENST00000428754 109 ntBASIC-0.34□□□□□ -2.46
NCAPD3P42695 AC087499.7-201ENST00000441958 109 ntBASIC-0.34□□□□□ -2.46
NCAPD3P42695 snoU13.11-201ENST00000459219 104 ntBASIC-0.34□□□□□ -2.46
NCAPD3P42695 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
NCAPD3P42695 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.34□□□□□ -2.46
NCAPD3P42695 AC090517.2-201ENST00000614966 680 ntBASIC-0.34□□□□□ -2.46
NCAPD3P42695 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.34□□□□□ -2.46
NCAPD3P42695 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 SSR1P2-201ENST00000415208 787 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 MLLT10P1-201ENST00000418346 262 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 AC069271.1-201ENST00000445577 156 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 RNU7-138P-201ENST00000459479 64 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 HIF1AP1-201ENST00000553642 175 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 MIR8076-201ENST00000611401 83 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 AC006504.8-201ENST00000621046 635 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 MIR4251-201ENST00000635819 61 ntBASIC-0.35□□□□□ -2.46
NCAPD3P42695 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 SNORD49B-201ENST00000365172 72 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 RNA5SP117-201ENST00000365294 118 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 SNORA8.2-201ENST00000384372 139 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
NCAPD3P42695 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 RNU6-613P-201ENST00000410412 108 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 RNA5SP451-201ENST00000410588 110 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.35□□□□□ -2.47
NCAPD3P42695 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.35□□□□□ -2.47
NCAPD3P42695 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.35□□□□□ -2.47
NCAPD3P42695 AC099654.13-201ENST00000639774 207 ntBASIC-0.35□□□□□ -2.47
NCAPD3P42695 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 RNU6-903P-201ENST00000391270 109 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 AL590002.1-201ENST00000406554 418 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.36□□□□□ -2.47
NCAPD3P42695 AL359672.1-201ENST00000442302 409 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.36□□□□□ -2.47
NCAPD3P42695 SNORD123-201ENST00000459473 70 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 AL355375.2-201ENST00000574825 175 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 MIR4771-2-201ENST00000577758 74 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 MIR4771-1-201ENST00000582617 74 ntBASIC-0.36□□□□□ -2.47
NCAPD3P42695 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.37□□□□□ -2.47
NCAPD3P42695 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.37□□□□□ -2.47
NCAPD3P42695 RNU6-580P-201ENST00000365159 107 ntBASIC-0.37□□□□□ -2.47
NCAPD3P42695 RNU6-108P-201ENST00000365558 107 ntBASIC-0.37□□□□□ -2.47
NCAPD3P42695 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.37□□□□□ -2.47
NCAPD3P42695 AC117470.1-201ENST00000381974 330 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms