Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 RNA5SP20-201ENST00000515976 84 ntBASIC0.72□□□□□ -2.29
PRPHP41219 RNA5SP220-201ENST00000516298 104 ntBASIC0.72□□□□□ -2.29
PRPHP41219 AC004817.2-201ENST00000561794 651 ntBASIC0.72□□□□□ -2.29
PRPHP41219 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
PRPHP41219 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
PRPHP41219 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.72□□□□□ -2.29
PRPHP41219 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
PRPHP41219 RNU6-407P-201ENST00000365280 104 ntBASIC0.71□□□□□ -2.3
PRPHP41219 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
PRPHP41219 RNU6-376P-201ENST00000384731 106 ntBASIC0.71□□□□□ -2.3
PRPHP41219 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
PRPHP41219 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
PRPHP41219 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
PRPHP41219 RNU6-1148P-201ENST00000410992 104 ntBASIC0.71□□□□□ -2.3
PRPHP41219 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.71□□□□□ -2.3
PRPHP41219 DLGAP5P1-201ENST00000430307 464 ntBASIC0.71□□□□□ -2.3
PRPHP41219 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
PRPHP41219 RNU6-1116P-201ENST00000517269 99 ntBASIC0.71□□□□□ -2.3
PRPHP41219 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.71□□□□□ -2.3
PRPHP41219 MTND2P38-201ENST00000522536 667 ntBASIC0.71□□□□□ -2.3
PRPHP41219 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.71□□□□□ -2.3
PRPHP41219 MIR3192-201ENST00000584920 77 ntBASIC0.71□□□□□ -2.3
PRPHP41219 AL162413.1-201ENST00000603198 110 ntBASIC0.71□□□□□ -2.3
PRPHP41219 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
PRPHP41219 DISC2.1-201ENST00000612827 205 ntBASIC0.71□□□□□ -2.3
PRPHP41219 AC024614.3-201ENST00000637860 256 ntBASIC0.71□□□□□ -2.3
PRPHP41219 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
PRPHP41219 Y_RNA.135-201ENST00000363439 95 ntBASIC0.7□□□□□ -2.3
PRPHP41219 Y_RNA.405-201ENST00000383979 100 ntBASIC0.7□□□□□ -2.3
PRPHP41219 Y_RNA.451-201ENST00000384200 100 ntBASIC0.7□□□□□ -2.3
PRPHP41219 Y_RNA.524-201ENST00000384564 100 ntBASIC0.7□□□□□ -2.3
PRPHP41219 Y_RNA.559-201ENST00000384686 107 ntBASIC0.7□□□□□ -2.3
PRPHP41219 Y_RNA.561-201ENST00000384694 100 ntBASIC0.7□□□□□ -2.3
PRPHP41219 COX6CP6-201ENST00000490840 228 ntBASIC0.7□□□□□ -2.3
PRPHP41219 RNU6-314P-201ENST00000516574 104 ntBASIC0.7□□□□□ -2.3
PRPHP41219 RNU6-1223P-201ENST00000517124 104 ntBASIC0.7□□□□□ -2.3
PRPHP41219 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.7□□□□□ -2.3
PRPHP41219 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
PRPHP41219 SNORA27.1-201ENST00000362604 124 ntBASIC0.69□□□□□ -2.3
PRPHP41219 Y_RNA.116-201ENST00000363292 103 ntBASIC0.69□□□□□ -2.3
PRPHP41219 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
PRPHP41219 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.69□□□□□ -2.3
PRPHP41219 RNU6-281P-201ENST00000384212 103 ntBASIC0.69□□□□□ -2.3
PRPHP41219 SNORD116-2-201ENST00000384274 95 ntBASIC0.69□□□□□ -2.3
PRPHP41219 Y_RNA.530-201ENST00000384587 101 ntBASIC0.69□□□□□ -2.3
PRPHP41219 SNORD116-6-201ENST00000384711 96 ntBASIC0.69□□□□□ -2.3
PRPHP41219 MIR518E-201ENST00000385252 88 ntBASIC0.69□□□□□ -2.3
PRPHP41219 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
PRPHP41219 MIR548J-201ENST00000408833 112 ntBASIC0.69□□□□□ -2.3
PRPHP41219 RNU2-16P-201ENST00000410712 136 ntBASIC0.69□□□□□ -2.3
PRPHP41219 RNU6-1001P-201ENST00000411265 100 ntBASIC0.69□□□□□ -2.3
PRPHP41219 MTND3P23-201ENST00000431980 347 ntBASIC0.69□□□□□ -2.3
PRPHP41219 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.69□□□□□ -2.3
PRPHP41219 AC046134.1-201ENST00000514454 666 ntBASIC0.69□□□□□ -2.3
PRPHP41219 RNU6-1088P-201ENST00000516850 104 ntBASIC0.69□□□□□ -2.3
PRPHP41219 AC022868.1-201ENST00000517767 391 ntBASIC0.69□□□□□ -2.3
PRPHP41219 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.69□□□□□ -2.3
PRPHP41219 AC012557.2-201ENST00000605919 418 ntBASIC0.69□□□□□ -2.3
PRPHP41219 AL357075.2-201ENST00000614906 189 ntBASIC0.69□□□□□ -2.3
PRPHP41219 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.69□□□□□ -2.3
PRPHP41219 AL442644.1-201ENST00000454390 3105 ntBASIC0.69□□□□□ -2.3
PRPHP41219 RNY3P3-201ENST00000363816 102 ntBASIC0.68□□□□□ -2.3
PRPHP41219 Y_RNA.414-201ENST00000384011 101 ntBASIC0.68□□□□□ -2.3
PRPHP41219 MTCYBP4-201ENST00000401524 249 ntBASIC0.68□□□□□ -2.3
PRPHP41219 ZNF885P-201ENST00000420174 1098 ntBASIC0.68□□□□□ -2.3
PRPHP41219 Z98949.2-201ENST00000440996 144 ntBASIC0.68□□□□□ -2.3
PRPHP41219 RNU6-1114P-201ENST00000516022 107 ntBASIC0.68□□□□□ -2.3
PRPHP41219 AC093023.1-201ENST00000547375 507 ntBASIC0.68□□□□□ -2.3
PRPHP41219 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.68□□□□□ -2.3
PRPHP41219 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
PRPHP41219 AC100810.6-201ENST00000638068 285 ntBASIC0.68□□□□□ -2.3
PRPHP41219 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
PRPHP41219 RNU4-41P-201ENST00000364426 143 ntBASIC0.67□□□□□ -2.3
PRPHP41219 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
PRPHP41219 SNORD116-11-201ENST00000383882 92 ntBASIC0.67□□□□□ -2.3
PRPHP41219 RNU1-139P-201ENST00000391307 165 ntBASIC0.67□□□□□ -2.3
PRPHP41219 MIR891A-201ENST00000401237 79 ntBASIC0.67□□□□□ -2.3
PRPHP41219 RNU5A-5P-201ENST00000411054 116 ntBASIC0.67□□□□□ -2.3
PRPHP41219 USP9YP30-201ENST00000430729 455 ntBASIC0.67□□□□□ -2.3
PRPHP41219 MTND1P29-201ENST00000448112 647 ntBASIC0.67□□□□□ -2.3
PRPHP41219 AC233266.1-201ENST00000454518 96 ntBASIC0.67□□□□□ -2.3
PRPHP41219 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.67□□□□□ -2.3
PRPHP41219 AC113410.1-201ENST00000505029 247 ntBASIC0.67□□□□□ -2.3
PRPHP41219 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.67□□□□□ -2.3
PRPHP41219 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.67□□□□□ -2.3
PRPHP41219 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
PRPHP41219 MIR3684-201ENST00000579779 74 ntBASIC0.67□□□□□ -2.3
PRPHP41219 MIR4273-201ENST00000582824 84 ntBASIC0.67□□□□□ -2.3
PRPHP41219 AC242852.1-201ENST00000612151 96 ntBASIC0.67□□□□□ -2.3
PRPHP41219 AC244015.1-201ENST00000622301 99 ntBASIC0.67□□□□□ -2.3
PRPHP41219 RNA5SP264-201ENST00000363115 107 ntBASIC0.66□□□□□ -2.3
PRPHP41219 RNU6-833P-201ENST00000363486 107 ntBASIC0.66□□□□□ -2.3
PRPHP41219 Y_RNA.336-201ENST00000365307 109 ntBASIC0.66□□□□□ -2.3
PRPHP41219 RNU6-1264P-201ENST00000383891 107 ntBASIC0.66□□□□□ -2.3
PRPHP41219 RNU6-842P-201ENST00000384269 107 ntBASIC0.66□□□□□ -2.3
PRPHP41219 Y_RNA.517-201ENST00000384551 106 ntBASIC0.66□□□□□ -2.3
PRPHP41219 RNU6-136P-201ENST00000384663 107 ntBASIC0.66□□□□□ -2.3
PRPHP41219 Y_RNA.554-201ENST00000384672 102 ntBASIC0.66□□□□□ -2.3
PRPHP41219 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.66□□□□□ -2.3
PRPHP41219 AL137792.2-201ENST00000443484 235 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms