Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HOXD13P35453 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.62□□□□□ -2.15
HOXD13P35453 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HOXD13P35453 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HOXD13P35453 Y_RNA.146-201ENST00000363549 102 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 Y_RNA.243-201ENST00000364481 109 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 RNU6-926P-201ENST00000384075 107 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 MIR559-201ENST00000385188 96 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.61□□□□□ -2.15
HOXD13P35453 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXD13P35453 Y_RNA.632-201ENST00000459189 102 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 RNU7-28P-201ENST00000516759 62 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 RNU2-56P-201ENST00000516826 190 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 RNU6-699P-201ENST00000517081 110 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXD13P35453 AC005828.6-201ENST00000606610 232 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 AL021879.1-201ENST00000611756 288 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 AC004467.1-201ENST00000615678 330 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 AC073349.3-201ENST00000617616 186 ntBASIC1.61□□□□□ -2.15
HOXD13P35453 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HOXD13P35453 RNU6-454P-201ENST00000364292 107 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 Y_RNA.265-201ENST00000364677 108 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 SNORD116-29-201ENST00000384516 83 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 SNORD19B-201ENST00000459623 84 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 AC099513.1-201ENST00000490423 301 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 AC104984.5-201ENST00000586878 94 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 VN1R91P-201ENST00000594377 169 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 AL138825.1-201ENST00000618587 192 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HOXD13P35453 AL513423.1-201ENST00000621695 132 ntBASIC1.6□□□□□ -2.15
HOXD13P35453 MT-TD-201ENST00000387419 68 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 MRPS18CP6-201ENST00000423587 223 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.59□□□□□ -2.15
HOXD13P35453 AL137792.2-201ENST00000443484 235 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 RPS29P29-201ENST00000456396 171 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 RNU6-341P-201ENST00000516973 96 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 AC019176.1-201ENST00000518519 225 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 AC023442.1-201ENST00000531247 422 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 AP002004.2-201ENST00000531656 154 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 AP002001.1-203ENST00000534002 267 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 AP001094.1-201ENST00000579805 193 ntBASIC1.59□□□□□ -2.15
HOXD13P35453 Y_RNA.27-201ENST00000362540 103 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 RNA5SP99-201ENST00000364020 114 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 Y_RNA.529-201ENST00000384586 119 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 MIR520G-201ENST00000385064 90 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXD13P35453 STAG3L5P-204ENST00000443759 179 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXD13P35453 AC005176.2-201ENST00000596933 147 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 AL390123.1-201ENST00000603216 237 ntBASIC1.58□□□□□ -2.16
HOXD13P35453 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
HOXD13P35453 RNY3P11-201ENST00000364153 102 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 Y_RNA.267-201ENST00000364679 109 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 RNU4-62P-201ENST00000410125 130 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 RNU7-152P-201ENST00000458982 64 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 AL163540.1-201ENST00000485382 386 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 SUMO2P16-201ENST00000519475 264 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 SNORD3E-202ENST00000627253 216 ntBASIC1.57□□□□□ -2.16
HOXD13P35453 RNU6-961P-201ENST00000363893 105 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 Y_RNA.463-201ENST00000384271 102 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXD13P35453 RPL30P13-201ENST00000418873 348 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 AC091021.1-201ENST00000468051 388 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 RNU6-1012P-201ENST00000516606 109 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXD13P35453 AC006600.1-201ENST00000572529 153 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 MIR4659A-201ENST00000580269 81 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 AL078604.3-201ENST00000615580 211 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.56□□□□□ -2.16
HOXD13P35453 Y_RNA.39-201ENST00000362620 98 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 U8.1-201ENST00000362843 134 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 RNU6-626P-201ENST00000363354 107 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 RNA5SP482-201ENST00000391269 118 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 RNU2-54P-201ENST00000410299 190 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 AL135790.2-201ENST00000437701 267 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 RNU2-12P-201ENST00000517216 168 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 AL358944.1-201ENST00000528537 144 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.55□□□□□ -2.16
HOXD13P35453 MIR3124-201ENST00000582636 67 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.55□□□□□ -2.16
HOXD13P35453 PRR13P7-201ENST00000605538 430 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 AL365434.2-201ENST00000607979 234 ntBASIC1.55□□□□□ -2.16
HOXD13P35453 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HOXD13P35453 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HOXD13P35453 Y_RNA.230-201ENST00000364348 109 ntBASIC1.54□□□□□ -2.16
HOXD13P35453 MIR660-201ENST00000385235 97 ntBASIC1.54□□□□□ -2.16
HOXD13P35453 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
HOXD13P35453 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
HOXD13P35453 SDAD1P3-201ENST00000427380 333 ntBASIC1.54□□□□□ -2.16
HOXD13P35453 AC096644.2-201ENST00000429278 159 ntBASIC1.54□□□□□ -2.16
HOXD13P35453 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms