Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SLC6A4P31645 MIR4769-201ENST00000584126 77 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 AC011921.3-201ENST00000605540 361 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 CENPCP1-201ENST00000533085 2578 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A4P31645 RNU6-651P-201ENST00000411040 105 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 PRELID3BP1-201ENST00000457142 540 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 RNU7-26P-201ENST00000458980 63 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 snoU13.15-201ENST00000459407 104 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 RPL36AP21-201ENST00000490372 323 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 RN7SL636P-201ENST00000497504 294 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 AC046143.2-201ENST00000609789 160 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 AC004792.1-201ENST00000614523 137 ntBASIC2.5□□□□□ -2.01
SLC6A4P31645 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SLC6A4P31645 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SLC6A4P31645 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SLC6A4P31645 RNU6-1020P-201ENST00000363684 107 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 RNU6-899P-201ENST00000363947 107 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 Y_RNA.310-201ENST00000365063 113 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 SNORA72.4-201ENST00000384174 132 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 AL135786.1-201ENST00000415892 214 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 PIGPP3-201ENST00000425307 415 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 RNA5SP20-201ENST00000515976 84 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC6A4P31645 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.49□□□□□ -2.01
SLC6A4P31645 AC026271.5-201ENST00000577873 130 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 MIR5692C2-201ENST00000577959 77 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 AC103810.6-201ENST00000606708 136 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 AL008718.3-201ENST00000610217 321 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.49□□□□□ -2.01
SLC6A4P31645 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SLC6A4P31645 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SLC6A4P31645 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 RNU6-801P-201ENST00000364087 105 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 RNU6-763P-201ENST00000390865 106 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 AL355497.1-201ENST00000406262 551 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 MIR548I3-201ENST00000408378 149 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 MIR548I1-201ENST00000408810 149 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 AC016909.1-201ENST00000415916 166 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 RNU1-131P-201ENST00000458943 161 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 RNU7-120P-201ENST00000459334 63 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 Y_RNA.637-201ENST00000459424 114 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 SUMO2P18-201ENST00000518873 252 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 AC021269.2-201ENST00000532318 330 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 AC024405.2-202ENST00000532731 184 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 AC013791.1-201ENST00000616619 62 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 FTX_2.1-201ENST00000618816 94 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 MAPK10-266ENST00000641066 6555 ntBASIC2.48□□□□□ -2.01
SLC6A4P31645 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC6A4P31645 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
SLC6A4P31645 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SLC6A4P31645 SNORA38-201ENST00000363946 132 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 SNORD114-30-201ENST00000364448 72 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 RNU6-407P-201ENST00000365280 104 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 DEFA7P-201ENST00000382676 285 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 RNU6-209P-201ENST00000384118 107 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 RNU6-160P-201ENST00000384591 107 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 Y_RNA.555-201ENST00000384673 110 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 RNU11-5P-201ENST00000391216 129 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 SNORA3.2-201ENST00000408221 125 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 MIR1253-201ENST00000408273 105 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 AL353689.1-201ENST00000438895 199 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC6A4P31645 AL137100.2-201ENST00000555786 315 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 AC072026.1-201ENST00000605023 201 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 AL365265.1-201ENST00000621045 234 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 MIR1291-201ENST00000627649 87 ntBASIC2.47□□□□□ -2.01
SLC6A4P31645 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SLC6A4P31645 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SLC6A4P31645 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.02
SLC6A4P31645 Y_RNA.124-201ENST00000363339 93 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 Y_RNA.435-201ENST00000384095 112 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 HMGN2P35-201ENST00000412164 270 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 AL135790.2-201ENST00000437701 267 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC6A4P31645 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 RNU6-1337P-201ENST00000516525 95 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 AP002392.1-201ENST00000537692 208 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC6A4P31645 MIR5688-201ENST00000580619 83 ntBASIC2.46□□□□□ -2.02
SLC6A4P31645 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC6A4P31645 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
SLC6A4P31645 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SLC6A4P31645 MIR340-201ENST00000362125 95 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 SNORA25.6-201ENST00000364121 118 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 Y_RNA.270-201ENST00000364693 104 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 RNU6-144P-201ENST00000383951 107 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 RNU4-70P-201ENST00000384579 139 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SLC6A4P31645 SNORA26.5-201ENST00000391215 123 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 RNA5SP425-201ENST00000410336 112 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC6A4P31645 RPS20P10-201ENST00000451209 253 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 RPS27P22-201ENST00000478056 241 ntBASIC2.45□□□□□ -2.02
SLC6A4P31645 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms