Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC011406.1-201ENST00000512440 370 ntBASIC1.96□□□□□ -2.1
HOXA13P31271 RNU6-408P-201ENST00000515910 100 ntBASIC1.96□□□□□ -2.1
HOXA13P31271 RNY3P15-201ENST00000516297 97 ntBASIC1.96□□□□□ -2.1
HOXA13P31271 RNU6-856P-201ENST00000516959 98 ntBASIC1.96□□□□□ -2.1
HOXA13P31271 MIR2355-201ENST00000517199 87 ntBASIC1.96□□□□□ -2.1
HOXA13P31271 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXA13P31271 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXA13P31271 AC091932.3-201ENST00000624223 323 ntBASIC1.96□□□□□ -2.1
HOXA13P31271 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HOXA13P31271 Y_RNA.19-201ENST00000362462 99 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 RNU6-472P-201ENST00000384299 107 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 MT-TW-201ENST00000387382 68 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 RNU4-30P-201ENST00000410245 143 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 AC005002.2-201ENST00000438228 269 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 AC073910.1-201ENST00000445047 438 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 MTCO2P24-201ENST00000515611 426 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA13P31271 MIR4299-201ENST00000577899 72 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 MIR4300-201ENST00000581016 96 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 MIR4503-201ENST00000582187 83 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 AL109918.3-201ENST00000603072 338 ntBASIC1.95□□□□□ -2.1
HOXA13P31271 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXA13P31271 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HOXA13P31271 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HOXA13P31271 RNU6-1266P-201ENST00000362794 105 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 snoU2_19.2-201ENST00000363024 80 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 U3.8-201ENST00000363675 217 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 RNU1-96P-201ENST00000364163 162 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 Y_RNA.286-201ENST00000364813 102 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 Y_RNA.483-201ENST00000384380 101 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 SNORA48.1-201ENST00000390879 135 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.94□□□□□ -2.1
HOXA13P31271 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
HOXA13P31271 RNU6-1146P-201ENST00000516282 102 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA13P31271 AC018448.1-201ENST00000552843 316 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.94□□□□□ -2.1
HOXA13P31271 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 AC010205.1-201ENST00000616668 449 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.94□□□□□ -2.1
HOXA13P31271 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.94□□□□□ -2.1
HOXA13P31271 RNU6-770P-201ENST00000363929 105 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 Y_RNA.193-201ENST00000363979 102 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 RNU6-457P-201ENST00000363999 107 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 RNU6-20P-201ENST00000384106 107 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 Y_RNA.526-201ENST00000384572 110 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 MRPL35P1-201ENST00000404272 572 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 AC008134.1-201ENST00000420943 193 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 RAB28P5-201ENST00000427490 651 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXA13P31271 RNU6-625P-201ENST00000459412 107 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 AC025465.3-201ENST00000510570 311 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 RNU6-570P-201ENST00000517051 105 ntBASIC1.93□□□□□ -2.1
HOXA13P31271 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXA13P31271 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXA13P31271 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXA13P31271 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HOXA13P31271 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXA13P31271 Y_RNA.16-201ENST00000362421 102 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 Y_RNA.101-201ENST00000363154 102 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 RNU6-454P-201ENST00000364292 107 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 Y_RNA.276-201ENST00000364732 109 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 SNORA63.7-201ENST00000365579 123 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 Y_RNA.439-201ENST00000384119 94 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 Y_RNA.498-201ENST00000384460 102 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 SNORA8-201ENST00000384574 139 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 RNU6-417P-201ENST00000384712 107 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 Y_RNA.602-201ENST00000410535 92 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.92□□□□□ -2.1
HOXA13P31271 PCNPP5-201ENST00000452246 481 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 SNORA40.15-201ENST00000516884 107 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 AP003733.2-201ENST00000529409 171 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.92□□□□□ -2.1
HOXA13P31271 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.92□□□□□ -2.1
HOXA13P31271 AC008749.1-201ENST00000597650 306 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 AC069114.2-201ENST00000604699 304 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 PRR13P7-201ENST00000605538 430 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 MIR502-201ENST00000606349 86 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 MIR376A1-201ENST00000616574 68 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
HOXA13P31271 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXA13P31271 RNU6-626P-201ENST00000363354 107 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 Y_RNA.149-201ENST00000363558 117 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 Y_RNA.183-201ENST00000363882 113 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 RNU6-1240P-201ENST00000365155 104 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 Y_RNA.376-201ENST00000365638 108 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 RNU6-196P-201ENST00000384315 107 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HOXA13P31271 RNA5SP323-201ENST00000391094 133 ntBASIC1.91□□□□□ -2.1
HOXA13P31271 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms