Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC100830.2-201ENST00000581636 240 ntBASIC0.08□□□□□ -2.4
CD40LGP29965 AL136370.1-201ENST00000608166 691 ntBASIC0.08□□□□□ -2.4
CD40LGP29965 MIR573-201ENST00000384964 99 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 MTCO3P10-201ENST00000455912 772 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 MTND1P22-201ENST00000510572 951 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 RNU11-2P-201ENST00000516898 142 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.07□□□□□ -2.4
CD40LGP29965 AL358944.1-201ENST00000528537 144 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 MIR1273G-201ENST00000577677 100 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 AC104695.3-201ENST00000604052 296 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 AC100812.1-201ENST00000607622 580 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 AL158063.1-201ENST00000615349 536 ntBASIC0.07□□□□□ -2.4
CD40LGP29965 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
CD40LGP29965 SNORA27.1-201ENST00000362604 124 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 RNU6-38P-201ENST00000384085 107 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 SNORA2B-201ENST00000384583 137 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 MIR489-201ENST00000384923 84 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 MIR1302-7-201ENST00000408841 72 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 RNA5SP95-201ENST00000410319 137 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 AL392103.1-201ENST00000447000 198 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 PCNPP5-201ENST00000452246 481 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 RNU7-187P-201ENST00000458985 68 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 RPL30P10-201ENST00000488148 337 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 AC074133.1-201ENST00000515696 183 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.06□□□□□ -2.4
CD40LGP29965 AP003327.1-201ENST00000529684 127 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 AC245884.10-201ENST00000597355 337 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 AL162730.1-201ENST00000605734 292 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 FAM157A-202ENST00000615155 405 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 AC015726.2-201ENST00000620112 122 ntBASIC0.06□□□□□ -2.4
CD40LGP29965 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CD40LGP29965 MIR18A-201ENST00000362310 71 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNORD68-201ENST00000363214 84 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNORD113-7-201ENST00000363762 77 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 RNA5SP48-201ENST00000363969 126 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 RNU4-66P-201ENST00000365199 138 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNORD14.1-201ENST00000365609 90 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 RNU6-136P-201ENST00000384663 107 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNORD37.1-201ENST00000390968 65 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNORA26.8-201ENST00000391306 124 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 RNU2-70P-201ENST00000410718 179 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 AL353193.1-201ENST00000421444 268 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 AL606489.2-201ENST00000433886 234 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 AL137792.2-201ENST00000443484 235 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNRPGP12-201ENST00000449481 213 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 RPS3AP17-201ENST00000472594 777 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 RNU6-1278P-201ENST00000516130 107 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 SNORA18.7-201ENST00000516910 131 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.05□□□□□ -2.4
CD40LGP29965 PIGPP4-201ENST00000584447 307 ntBASIC0.05□□□□□ -2.4
CD40LGP29965 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 RNU6-369P-201ENST00000362515 102 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 RNU5A-6P-201ENST00000384136 116 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 RNU6-790P-201ENST00000384479 105 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 MIR520G-201ENST00000385064 90 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 MIR136-201ENST00000385207 82 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 NDUFA4P2-201ENST00000489989 244 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 Y_RNA.654-201ENST00000497848 106 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 MTCO2P30-201ENST00000503662 364 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.04□□□□□ -2.4
CD40LGP29965 RNA5SP401-201ENST00000515920 127 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 MTCO2P4-201ENST00000517968 247 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 AC093027.1-201ENST00000546698 429 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 AC026371.1-201ENST00000551867 419 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 AC092807.2-201ENST00000609367 243 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 AC073534.2-201ENST00000620377 381 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 AC092634.7-201ENST00000621022 103 ntBASIC0.04□□□□□ -2.4
CD40LGP29965 RNA5SP62-201ENST00000363457 110 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 Y_RNA.151-201ENST00000363566 112 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 Y_RNA.167-201ENST00000363735 109 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 RNU5F-3P-201ENST00000363767 117 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 RNU6-117P-201ENST00000365415 107 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 RNU4-20P-201ENST00000365601 151 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 CALM2P3-201ENST00000400429 449 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 MTCYBP4-201ENST00000401524 249 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 AC243428.1-201ENST00000421099 264 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 MTCO2P19-201ENST00000427513 598 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 MTND1P27-201ENST00000451117 902 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 RNU6-863P-201ENST00000515989 104 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 RNU7-43P-201ENST00000516554 64 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 AC127459.3-201ENST00000624328 466 ntBASIC0.03□□□□□ -2.4
CD40LGP29965 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CD40LGP29965 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CD40LGP29965 EIF4E2P1-201ENST00000393781 255 ntBASIC0.02□□□□□ -2.41
CD40LGP29965 SNORD83.1-201ENST00000411362 77 ntBASIC0.02□□□□□ -2.41
CD40LGP29965 MTCO1P20-201ENST00000425366 358 ntBASIC0.02□□□□□ -2.41
CD40LGP29965 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.02□□□□□ -2.41
CD40LGP29965 AC022523.2-201ENST00000561045 150 ntBASIC0.02□□□□□ -2.41
CD40LGP29965 AC040904.1-201ENST00000590850 223 ntBASIC0.02□□□□□ -2.41
CD40LGP29965 AC117470.1-201ENST00000381974 330 ntBASIC0.01□□□□□ -2.41
CD40LGP29965 MIR520H-201ENST00000385126 88 ntBASIC0.01□□□□□ -2.41
CD40LGP29965 AL390729.2-201ENST00000416137 156 ntBASIC0.01□□□□□ -2.41
CD40LGP29965 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.01□□□□□ -2.41
CD40LGP29965 AC005534.2-201ENST00000431047 433 ntBASIC0.01□□□□□ -2.41
CD40LGP29965 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 335.6 ms