Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.07□□□□□ -2.4
HLA-DMBP28068 MRPS10P2-201ENST00000431226 381 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 HSFY5P-201ENST00000453726 309 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 RNU6-1096P-201ENST00000517089 102 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.07□□□□□ -2.4
HLA-DMBP28068 AP003327.1-201ENST00000529684 127 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 AL121757.2-201ENST00000611223 313 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 AL354950.2-201ENST00000617939 290 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 AC009248.2-201ENST00000619826 254 ntBASIC0.07□□□□□ -2.4
HLA-DMBP28068 SNORA27.1-201ENST00000362604 124 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 RNU4-45P-201ENST00000365469 141 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 RNU6-376P-201ENST00000384731 106 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 RNY3P10-201ENST00000384764 102 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 MIR1298-201ENST00000408783 112 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 MIR1302-7-201ENST00000408841 72 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 AC018865.2-201ENST00000423631 129 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 AL358934.1-201ENST00000432346 324 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 AL031667.1-201ENST00000440222 725 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 PCNPP5-201ENST00000452246 481 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 AC091885.1-201ENST00000506658 268 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 RNA5SP20-201ENST00000515976 84 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 SNORA19.2-201ENST00000516013 114 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 RNU6-759P-201ENST00000516740 103 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 MTCO2P4-201ENST00000517968 247 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 AC023442.1-201ENST00000531247 422 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 MIR4764-201ENST00000580680 88 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 AC109347.2-201ENST00000610220 349 ntBASIC0.06□□□□□ -2.4
HLA-DMBP28068 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.06□□□□□ -2.4
HLA-DMBP28068 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
HLA-DMBP28068 MIR1-1-201ENST00000362147 71 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 MIR103A1-201ENST00000362165 78 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 SNORD113-7-201ENST00000363762 77 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 RNU6-117P-201ENST00000365415 107 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 Y_RNA.378-201ENST00000365652 113 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.05□□□□□ -2.4
HLA-DMBP28068 RNU5A-6P-201ENST00000384136 116 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 CALM2P3-201ENST00000400429 449 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 RNU6-1304P-201ENST00000411374 106 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 PIGPP3-201ENST00000425307 415 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AL137792.2-201ENST00000443484 235 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.05□□□□□ -2.4
HLA-DMBP28068 MTCO3P10-201ENST00000455912 772 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.05□□□□□ -2.4
HLA-DMBP28068 Y_RNA.654-201ENST00000497848 106 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AC018710.1-201ENST00000506509 158 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AC114811.1-201ENST00000507207 168 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.05□□□□□ -2.4
HLA-DMBP28068 AC074133.1-201ENST00000515696 183 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 RNU6-1278P-201ENST00000516130 107 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 RNU7-43P-201ENST00000516554 64 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 RNU4-77P-201ENST00000516692 156 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.05□□□□□ -2.4
HLA-DMBP28068 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.05□□□□□ -2.4
HLA-DMBP28068 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.05□□□□□ -2.4
HLA-DMBP28068 UBL5P4-201ENST00000562584 236 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 MIR3915-201ENST00000578518 97 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 MIR4300-201ENST00000581016 96 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AC245884.10-201ENST00000597355 337 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AL136370.1-201ENST00000608166 691 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 FAM157A-202ENST00000615155 405 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 AC015726.2-201ENST00000620112 122 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.05□□□□□ -2.4
HLA-DMBP28068 MIR18A-201ENST00000362310 71 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 RNU6-369P-201ENST00000362515 102 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 SNORD44.1-201ENST00000363202 61 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 Y_RNA.167-201ENST00000363735 109 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 RNU6-654P-201ENST00000364373 107 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 U8.5-201ENST00000364528 136 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 SNORD14.1-201ENST00000365609 90 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 AC117470.1-201ENST00000381974 330 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 RNU6-38P-201ENST00000384085 107 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 RNU6-1103P-201ENST00000384150 107 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 MTCYBP4-201ENST00000401524 249 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.04□□□□□ -2.4
HLA-DMBP28068 AL353572.1-201ENST00000442490 417 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.04□□□□□ -2.4
HLA-DMBP28068 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.04□□□□□ -2.4
HLA-DMBP28068 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.04□□□□□ -2.4
HLA-DMBP28068 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.04□□□□□ -2.4
HLA-DMBP28068 RNU6-1038P-201ENST00000516516 104 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 AC060788.1-201ENST00000521318 469 ntBASIC0.04□□□□□ -2.4
HLA-DMBP28068 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.04□□□□□ -2.4
HLA-DMBP28068 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.03□□□□□ -2.4
HLA-DMBP28068 Y_RNA.30-201ENST00000362572 97 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 RNU6-407P-201ENST00000365280 104 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
HLA-DMBP28068 MIR15B-201ENST00000385045 98 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 MIR136-201ENST00000385207 82 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 RNU6-613P-201ENST00000410412 108 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 AC243428.1-201ENST00000421099 264 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 SNRPGP12-201ENST00000449481 213 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 MTCO2P30-201ENST00000503662 364 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 MIR4762-201ENST00000585261 75 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 AC005014.3-201ENST00000605985 190 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 MIR2909-201ENST00000617113 69 ntBASIC0.03□□□□□ -2.4
HLA-DMBP28068 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.02□□□□□ -2.41
HLA-DMBP28068 RNU6-541P-201ENST00000384709 110 ntBASIC0.02□□□□□ -2.41
HLA-DMBP28068 MT-TH-201ENST00000387441 69 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms