Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC4.63□□□□□ -1.67
CD44P16070 RPS29P17-201ENST00000430795 166 ntBASIC4.63□□□□□ -1.67
CD44P16070 AC245047.7-201ENST00000440265 293 ntBASIC4.63□□□□□ -1.67
CD44P16070 RNU7-137P-201ENST00000516788 62 ntBASIC4.63□□□□□ -1.67
CD44P16070 AC104027.1-201ENST00000521887 300 ntBASIC4.63□□□□□ -1.67
CD44P16070 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.63□□□□□ -1.67
CD44P16070 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD44P16070 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.63□□□□□ -1.67
CD44P16070 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CD44P16070 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CD44P16070 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CD44P16070 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
CD44P16070 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CD44P16070 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.62□□□□□ -1.67
CD44P16070 HSBP1P2-201ENST00000299671 229 ntBASIC4.62□□□□□ -1.67
CD44P16070 Y_RNA.12-201ENST00000362393 112 ntBASIC4.62□□□□□ -1.67
CD44P16070 RNU6-829P-201ENST00000363700 112 ntBASIC4.62□□□□□ -1.67
CD44P16070 RNA5SP447-201ENST00000363749 119 ntBASIC4.62□□□□□ -1.67
CD44P16070 RNU1-132P-201ENST00000364300 164 ntBASIC4.62□□□□□ -1.67
CD44P16070 AC015818.7-201ENST00000428754 109 ntBASIC4.62□□□□□ -1.67
CD44P16070 RN7SL810P-201ENST00000493031 276 ntBASIC4.62□□□□□ -1.67
CD44P16070 MIR7702-201ENST00000621931 59 ntBASIC4.62□□□□□ -1.67
CD44P16070 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CD44P16070 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CD44P16070 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CD44P16070 AL355596.1-201ENST00000565399 3996 ntBASIC4.62□□□□□ -1.67
CD44P16070 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.61□□□□□ -1.67
CD44P16070 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CD44P16070 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CD44P16070 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CD44P16070 RNU6-681P-201ENST00000364012 104 ntBASIC4.61□□□□□ -1.67
CD44P16070 SNORA1.2-201ENST00000365189 134 ntBASIC4.61□□□□□ -1.67
CD44P16070 RNU6-1086P-201ENST00000410930 100 ntBASIC4.61□□□□□ -1.67
CD44P16070 AC004552.1-201ENST00000419089 348 ntBASIC4.61□□□□□ -1.67
CD44P16070 AC015922.2-201ENST00000435593 184 ntBASIC4.61□□□□□ -1.67
CD44P16070 RPS29P29-201ENST00000456396 171 ntBASIC4.61□□□□□ -1.67
CD44P16070 RPS29P33-201ENST00000456717 146 ntBASIC4.61□□□□□ -1.67
CD44P16070 RPS26P3-201ENST00000470205 348 ntBASIC4.61□□□□□ -1.67
CD44P16070 AC090543.2-201ENST00000483963 348 ntBASIC4.61□□□□□ -1.67
CD44P16070 AC004057.1-201ENST00000485827 348 ntBASIC4.61□□□□□ -1.67
CD44P16070 PHBP14-201ENST00000512887 367 ntBASIC4.61□□□□□ -1.67
CD44P16070 MIR4765-201ENST00000585007 77 ntBASIC4.61□□□□□ -1.67
CD44P16070 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CD44P16070 MFSD8-233ENST00000641482 4860 ntBASIC4.6□□□□□ -1.67
CD44P16070 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD44P16070 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD44P16070 RNU6-330P-201ENST00000363015 107 ntBASIC4.6□□□□□ -1.67
CD44P16070 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CD44P16070 CD24P4-201ENST00000382840 243 ntBASIC4.6□□□□□ -1.67
CD44P16070 RNU6-895P-201ENST00000384125 103 ntBASIC4.6□□□□□ -1.67
CD44P16070 MIR942-201ENST00000401111 86 ntBASIC4.6□□□□□ -1.67
CD44P16070 AC011998.1-201ENST00000433403 117 ntBASIC4.6□□□□□ -1.67
CD44P16070 RPS26P15-201ENST00000488067 348 ntBASIC4.6□□□□□ -1.67
CD44P16070 RNA5SP112-201ENST00000515937 99 ntBASIC4.6□□□□□ -1.67
CD44P16070 RNU6-991P-201ENST00000516168 107 ntBASIC4.6□□□□□ -1.67
CD44P16070 RNU7-28P-201ENST00000516759 62 ntBASIC4.6□□□□□ -1.67
CD44P16070 YWHAEP2-201ENST00000580066 112 ntBASIC4.6□□□□□ -1.67
CD44P16070 YWHAEP3-201ENST00000582767 121 ntBASIC4.6□□□□□ -1.67
CD44P16070 AP000346.3-201ENST00000622821 210 ntBASIC4.6□□□□□ -1.67
CD44P16070 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.6□□□□□ -1.67
CD44P16070 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.6□□□□□ -1.67
CD44P16070 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.6□□□□□ -1.67
CD44P16070 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CD44P16070 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.59□□□□□ -1.67
CD44P16070 SNORA24-201ENST00000384096 131 ntBASIC4.59□□□□□ -1.67
CD44P16070 RNU6-163P-201ENST00000384396 106 ntBASIC4.59□□□□□ -1.67
CD44P16070 RNU6-913P-201ENST00000390913 95 ntBASIC4.59□□□□□ -1.67
CD44P16070 AC069285.2-201ENST00000440210 275 ntBASIC4.59□□□□□ -1.67
CD44P16070 RNU7-73P-201ENST00000458743 63 ntBASIC4.59□□□□□ -1.67
CD44P16070 AC025445.1-201ENST00000502728 300 ntBASIC4.59□□□□□ -1.67
CD44P16070 RNU7-79P-201ENST00000516082 62 ntBASIC4.59□□□□□ -1.67
CD44P16070 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.59□□□□□ -1.67
CD44P16070 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.59□□□□□ -1.67
CD44P16070 RNU6-1116P-201ENST00000517269 99 ntBASIC4.59□□□□□ -1.67
CD44P16070 Y_RNA.722-201ENST00000517279 114 ntBASIC4.59□□□□□ -1.67
CD44P16070 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.59□□□□□ -1.67
CD44P16070 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD44P16070 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CD44P16070 MFSD8-242ENST00000641690 4199 ntBASIC4.59□□□□□ -1.68
CD44P16070 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.59□□□□□ -1.68
CD44P16070 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.68
CD44P16070 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD44P16070 Y_RNA.370-201ENST00000365589 108 ntBASIC4.58□□□□□ -1.68
CD44P16070 RNU6-160P-201ENST00000384591 107 ntBASIC4.58□□□□□ -1.68
CD44P16070 SNORA3C-201ENST00000408792 125 ntBASIC4.58□□□□□ -1.68
CD44P16070 TRIAP1P1-201ENST00000427062 225 ntBASIC4.58□□□□□ -1.68
CD44P16070 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.58□□□□□ -1.68
CD44P16070 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.58□□□□□ -1.68
CD44P16070 AC006011.1-201ENST00000442758 349 ntBASIC4.58□□□□□ -1.68
CD44P16070 AL163195.1-201ENST00000496941 348 ntBASIC4.58□□□□□ -1.68
CD44P16070 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD44P16070 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.58□□□□□ -1.68
CD44P16070 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD44P16070 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
CD44P16070 CEP170P1-201ENST00000502249 4587 ntBASIC4.58□□□□□ -1.68
CD44P16070 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CD44P16070 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD44P16070 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.57□□□□□ -1.68
CD44P16070 MIR192-201ENST00000384915 110 ntBASIC4.57□□□□□ -1.68
CD44P16070 MIR1262-201ENST00000408276 93 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms