Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-1.96□□□□□ -2.72
VCANP13611 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-1.96□□□□□ -2.72
VCANP13611 AC090772.4-201ENST00000623599 362 ntBASIC-1.96□□□□□ -2.72
VCANP13611 SNORD115-15-201ENST00000364809 81 ntBASIC-1.96□□□□□ -2.72
VCANP13611 SNORA2.2-201ENST00000365473 135 ntBASIC-1.96□□□□□ -2.72
VCANP13611 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.96□□□□□ -2.72
VCANP13611 SNORA25.17-201ENST00000517184 124 ntBASIC-1.96□□□□□ -2.72
VCANP13611 AL022067.1-201ENST00000602426 454 ntBASIC-1.96□□□□□ -2.72
VCANP13611 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.97□□□□□ -2.72
VCANP13611 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.97□□□□□ -2.72
VCANP13611 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-1.97□□□□□ -2.72
VCANP13611 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.97□□□□□ -2.72
VCANP13611 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.97□□□□□ -2.72
VCANP13611 MIR3192-201ENST00000584920 77 ntBASIC-1.97□□□□□ -2.72
VCANP13611 SNORD114-29-201ENST00000364819 70 ntBASIC-1.97□□□□□ -2.73
VCANP13611 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-1.97□□□□□ -2.73
VCANP13611 RNU6-469P-201ENST00000516253 101 ntBASIC-1.97□□□□□ -2.73
VCANP13611 RNU6-966P-201ENST00000516479 104 ntBASIC-1.97□□□□□ -2.73
VCANP13611 AL157687.1-201ENST00000554853 619 ntBASIC-1.97□□□□□ -2.73
VCANP13611 AC008521.1-201ENST00000587471 187 ntBASIC-1.97□□□□□ -2.73
VCANP13611 AC080013.3-201ENST00000606839 578 ntBASIC-1.97□□□□□ -2.73
VCANP13611 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-1.97□□□□□ -2.73
VCANP13611 AC006927.4-201ENST00000639187 543 ntBASIC-1.97□□□□□ -2.73
VCANP13611 RNU5A-1-201ENST00000362698 116 ntBASIC-1.98□□□□□ -2.73
VCANP13611 RNA5SP467-201ENST00000391274 118 ntBASIC-1.98□□□□□ -2.73
VCANP13611 RNA5SP106-201ENST00000517274 100 ntBASIC-1.98□□□□□ -2.73
VCANP13611 MTND2P7-201ENST00000521337 640 ntBASIC-1.98□□□□□ -2.73
VCANP13611 AC023538.1-201ENST00000534576 736 ntBASIC-1.98□□□□□ -2.73
VCANP13611 MIR5704-201ENST00000584029 77 ntBASIC-1.98□□□□□ -2.73
VCANP13611 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.98□□□□□ -2.73
VCANP13611 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-1.98□□□□□ -2.73
VCANP13611 AC097478.2-201ENST00000610572 514 ntBASIC-1.98□□□□□ -2.73
VCANP13611 RNU6-403P-201ENST00000363163 104 ntBASIC-1.98□□□□□ -2.73
VCANP13611 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.98□□□□□ -2.73
VCANP13611 AC121247.2-201ENST00000604776 136 ntBASIC-1.98□□□□□ -2.73
VCANP13611 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.98□□□□□ -2.73
VCANP13611 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.99□□□□□ -2.73
VCANP13611 AC010531.2-201ENST00000465012 153 ntBASIC-1.99□□□□□ -2.73
VCANP13611 RNU6-135P-201ENST00000516769 101 ntBASIC-1.99□□□□□ -2.73
VCANP13611 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.99□□□□□ -2.73
VCANP13611 RNU4-10P-201ENST00000364383 140 ntBASIC-1.99□□□□□ -2.73
VCANP13611 RNU6-534P-201ENST00000364877 106 ntBASIC-1.99□□□□□ -2.73
VCANP13611 MIR181A1-201ENST00000385026 110 ntBASIC-1.99□□□□□ -2.73
VCANP13611 AC244669.1-204ENST00000621564 178 ntBASIC-1.99□□□□□ -2.73
VCANP13611 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.99□□□□□ -2.73
VCANP13611 SGO1P1-201ENST00000603525 1447 ntBASIC-2□□□□□ -2.73
VCANP13611 RNU6-613P-201ENST00000410412 108 ntBASIC-2□□□□□ -2.73
VCANP13611 AC010468.3-201ENST00000508225 458 ntBASIC-2□□□□□ -2.73
VCANP13611 RNU6-1095P-201ENST00000516148 108 ntBASIC-2□□□□□ -2.73
VCANP13611 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-2□□□□□ -2.73
VCANP13611 MIR4275-201ENST00000636486 87 ntBASIC-2□□□□□ -2.73
VCANP13611 Y_RNA.222-201ENST00000364264 102 ntBASIC-2□□□□□ -2.73
VCANP13611 SNORD115-35-201ENST00000365122 82 ntBASIC-2□□□□□ -2.73
VCANP13611 snoU13.16-201ENST00000459350 104 ntBASIC-2□□□□□ -2.73
VCANP13611 RNU6-390P-201ENST00000516259 103 ntBASIC-2□□□□□ -2.73
VCANP13611 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-2□□□□□ -2.73
VCANP13611 GMFBP1-201ENST00000467831 427 ntBASIC-2.01□□□□□ -2.73
VCANP13611 SNORD63.1-201ENST00000516178 80 ntBASIC-2.01□□□□□ -2.73
VCANP13611 RNU6-415P-201ENST00000516252 97 ntBASIC-2.01□□□□□ -2.73
VCANP13611 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-2.01□□□□□ -2.73
VCANP13611 FTX_4.1-201ENST00000616291 147 ntBASIC-2.01□□□□□ -2.73
VCANP13611 AL450472.1-202ENST00000637286 180 ntBASIC-2.01□□□□□ -2.73
VCANP13611 SNORD28-201ENST00000384706 75 ntBASIC-2.01□□□□□ -2.73
VCANP13611 HMGN2P32-201ENST00000444648 269 ntBASIC-2.01□□□□□ -2.73
VCANP13611 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-2.01□□□□□ -2.73
VCANP13611 SCARNA15.2-201ENST00000516409 127 ntBASIC-2.01□□□□□ -2.73
VCANP13611 RNU7-188P-201ENST00000517063 64 ntBASIC-2.01□□□□□ -2.73
VCANP13611 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-2.01□□□□□ -2.73
VCANP13611 MIR8068-201ENST00000618032 68 ntBASIC-2.01□□□□□ -2.73
VCANP13611 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.02□□□□□ -2.73
VCANP13611 RNU6-252P-201ENST00000363232 107 ntBASIC-2.02□□□□□ -2.73
VCANP13611 AC074085.1-201ENST00000413598 418 ntBASIC-2.02□□□□□ -2.73
VCANP13611 MIR2115-201ENST00000516657 100 ntBASIC-2.02□□□□□ -2.73
VCANP13611 AC245505.1-201ENST00000556398 224 ntBASIC-2.02□□□□□ -2.73
VCANP13611 AC015688.2-201ENST00000584523 262 ntBASIC-2.02□□□□□ -2.73
VCANP13611 AC008250.2-201ENST00000615261 205 ntBASIC-2.02□□□□□ -2.73
VCANP13611 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.02□□□□□ -2.73
VCANP13611 SNORA67.2-201ENST00000384300 149 ntBASIC-2.02□□□□□ -2.73
VCANP13611 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-2.02□□□□□ -2.73
VCANP13611 SNORD75.2-201ENST00000408784 58 ntBASIC-2.02□□□□□ -2.73
VCANP13611 RPL31P54-201ENST00000429803 370 ntBASIC-2.02□□□□□ -2.73
VCANP13611 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-2.02□□□□□ -2.73
VCANP13611 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.02□□□□□ -2.73
VCANP13611 RNY3P4-201ENST00000384428 101 ntBASIC-2.02□□□□□ -2.73
VCANP13611 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-2.02□□□□□ -2.73
VCANP13611 AC124947.2-202ENST00000552735 133 ntBASIC-2.03□□□□□ -2.73
VCANP13611 AC091965.4-201ENST00000607691 587 ntBASIC-2.03□□□□□ -2.73
VCANP13611 AL354696.1-201ENST00000614652 497 ntBASIC-2.03□□□□□ -2.73
VCANP13611 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.03□□□□□ -2.73
VCANP13611 SNORA24-201ENST00000384096 131 ntBASIC-2.03□□□□□ -2.73
VCANP13611 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.03□□□□□ -2.73
VCANP13611 AC011352.1-201ENST00000512300 793 ntBASIC-2.03□□□□□ -2.73
VCANP13611 SNORA31.14-201ENST00000516728 116 ntBASIC-2.03□□□□□ -2.73
VCANP13611 AL359075.3-201ENST00000613288 217 ntBASIC-2.03□□□□□ -2.73
VCANP13611 MIR376A2-201ENST00000636782 80 ntBASIC-2.03□□□□□ -2.73
VCANP13611 Y_RNA.171-201ENST00000363760 102 ntBASIC-2.04□□□□□ -2.74
VCANP13611 AC018880.2-201ENST00000414265 201 ntBASIC-2.04□□□□□ -2.74
VCANP13611 ACA59.2-201ENST00000517061 156 ntBASIC-2.04□□□□□ -2.74
VCANP13611 MIR4676-201ENST00000583078 72 ntBASIC-2.04□□□□□ -2.74
VCANP13611 MIR3123-201ENST00000583417 75 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms