Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 Y_RNA.224-201ENST00000364308 111 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 SNORA72.2-201ENST00000365028 127 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RNU6-407P-201ENST00000365280 104 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RNU1-115P-201ENST00000365329 160 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 MTCO3P19-201ENST00000415864 321 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RPL26P26-201ENST00000480251 434 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RNU6-911P-201ENST00000516523 104 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RNU6-1012P-201ENST00000516606 109 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RN7SKP295-201ENST00000517264 153 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 AC004467.1-201ENST00000615678 330 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 AC240442.1-201ENST00000616055 283 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.82□□□□□ -2.12
ACTN1P12814 Y_RNA.112-201ENST00000363250 102 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 RNA5SP363-201ENST00000365072 115 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 SNORA20B-201ENST00000384220 132 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 RNU6-474P-201ENST00000384243 107 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 MIR520A-201ENST00000384862 85 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ACTN1P12814 AL355796.1-201ENST00000406706 323 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 AC009310.1-201ENST00000414414 451 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 MCFD2P1-201ENST00000417812 300 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 MTCO2P12-201ENST00000427426 682 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 Y_RNA.639-201ENST00000458981 102 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.81□□□□□ -2.12
ACTN1P12814 AC022432.1-201ENST00000595739 310 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 RPS29P30-201ENST00000600975 111 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.81□□□□□ -2.12
ACTN1P12814 RNU6-392P-201ENST00000364926 101 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 Y_RNA.395-201ENST00000383945 109 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 RNU6-20P-201ENST00000384106 107 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 RNA5SP109-201ENST00000391010 116 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.8□□□□□ -2.12
ACTN1P12814 AC073910.1-201ENST00000445047 438 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 AL163195.1-201ENST00000496941 348 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 RNU1-142P-201ENST00000516682 145 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 AL137100.2-201ENST00000555786 315 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 MIR4438-201ENST00000585271 93 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 AL359075.3-201ENST00000613288 217 ntBASIC1.8□□□□□ -2.12
ACTN1P12814 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
ACTN1P12814 RNU6-626P-201ENST00000363354 107 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 RNU6-60P-201ENST00000364792 103 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.79□□□□□ -2.12
ACTN1P12814 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.79□□□□□ -2.12
ACTN1P12814 PMCHL1-202ENST00000423102 261 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.79□□□□□ -2.12
ACTN1P12814 HSPE1P9-201ENST00000440046 311 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 MTND4P19-201ENST00000446659 478 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 AC010598.1-201ENST00000510378 103 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 CBX3P4-201ENST00000538909 354 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.79□□□□□ -2.12
ACTN1P12814 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.79□□□□□ -2.12
ACTN1P12814 AC005176.2-201ENST00000596933 147 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 U6.115-201ENST00000636045 103 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 U6.108-201ENST00000637764 58 ntBASIC1.79□□□□□ -2.12
ACTN1P12814 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ACTN1P12814 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ACTN1P12814 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ACTN1P12814 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ACTN1P12814 Y_RNA.101-201ENST00000363154 102 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 Y_RNA.124-201ENST00000363339 93 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 Y_RNA.148-201ENST00000363557 117 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 SNORA4.2-201ENST00000365313 147 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 RNU6-1310P-201ENST00000384153 107 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 MIR489-201ENST00000384923 84 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 RPS20P15-201ENST00000412792 311 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 SDAD1P3-201ENST00000427380 333 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.78□□□□□ -2.12
ACTN1P12814 MRPS10P1-201ENST00000448483 130 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 Y_RNA.631-201ENST00000459607 101 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 RNU1-92P-201ENST00000517017 135 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 MIR6504-201ENST00000613520 61 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 AL138825.1-201ENST00000618587 192 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 U6.73-201ENST00000619194 103 ntBASIC1.78□□□□□ -2.12
ACTN1P12814 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.78□□□□□ -2.12
ACTN1P12814 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ACTN1P12814 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
ACTN1P12814 AC005592.1-201ENST00000566527 1640 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 SNORA7.1-201ENST00000363750 139 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 Y_RNA.216-201ENST00000364205 93 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 RNU6-450P-201ENST00000364654 107 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 Y_RNA.466-201ENST00000384294 113 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 MIR515-2-201ENST00000384883 83 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 MIR515-1-201ENST00000384884 83 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 EBAG9P1-201ENST00000418955 543 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.77□□□□□ -2.13
ACTN1P12814 AL606517.2-201ENST00000442855 241 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 SNORA40.14-201ENST00000516543 86 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 RNU6-1153P-201ENST00000516760 105 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
ACTN1P12814 AC040926.1-201ENST00000530195 238 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 AL645939.4-201ENST00000604495 135 ntBASIC1.77□□□□□ -2.13
ACTN1P12814 AC010900.2-201ENST00000604508 210 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms